RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 HLA-CQ95604 372 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 ZNF799Q96GE5 643 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 OCSTAMPQ9BR26 566 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 PECRQ9BY49 303 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 GSKIPQ9P0R6 139 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 DKKL1Q9UK85 242 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 SPRY1O43609 319 aaPredicted RBP13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 SFT2D2O95562 160 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 F10P00742 488 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 ADH6P28332 368 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 RPS18P62269 152 aaKnown RBP13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 BRICD5Q6PL45 260 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 C20orf196Q8IYI0 205 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 TMEM156Q8N614 296 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 ZIC4Q8N9L1 334 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 DYRK2Q92630 601 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 IMMP1LQ96LU5 166 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 ULBP2Q9BZM5 246 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 METTL8Q9H825 291 aaKnown RBP13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 URB1O60287 2271 aaKnown RBP13.63□□□□□ -0.23
TMEM50A-201ENST00000374358 DHRS7CA6NNS2 312 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 FOXI3A8MTJ6 420 aaPredicted RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 DHHO43323 396 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 PDGFBP01127 241 aaPredicted RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 IGLV3-1P01715 115 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 TAS2R31P59538 309 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 RAB32Q13637 225 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 PRF1P14222 555 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 RPS2P15880 293 aaKnown RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 LSM6P62312 80 aaKnown RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 ZNF239Q16600 458 aaKnown RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 YRDCQ86U90 279 aaKnown RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 LHFPL1Q86WI0 220 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 BATF2Q8N1L9 274 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 FAM89BQ8N5H3 189 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 ALKBH3Q96Q83 286 aaPredicted RBP13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 CHST5Q9GZS9 411 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 TMEM231Q9H6L2 316 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 OSGIN2Q9Y236 505 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 SHANK1Q9Y566 2161 aa13.62□□□□□ -0.23
TMEM50A-201ENST00000374358 PRRC2CQ9Y520 2896 aaKnown RBP13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 ATP6V1G2-DDX39BF2Z307 99 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 GPR31O00270 319 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 ONECUT2O95948 504 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 ACTL6AO96019 429 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 NAT2P11245 290 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 FPR2P25090 351 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 RRADP55042 308 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 S100A10P60903 97 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 PEG10Q86TG7 708 aaKnown RBP13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 CDC6Q99741 560 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 PIGQQ9BRB3 760 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 NMES1Q9C002 83 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 CYTL1Q9NRR1 136 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 PILRBQ9UKJ0 227 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 FREM1Q5H8C1 2179 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 ASPMQ8IZT6 3477 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 LOC102725191A0A1B0GVB3 256 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 DNASE2O00115 360 aaPredicted RBP13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 FGF5P12034 268 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 PNLIPRP3Q17RR3 467 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 C10orf128Q5T292 105 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 CDCP2Q5VXM1 449 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 V9GYS6 101 aa13.61□□□□□ -0.23
TMEM50A-201ENST00000374358 LOC102723996A0A087X1L8 192 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 TEX13DA0A0J9YY54 714 aaPredicted RBP13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 FAM230AA0A1W2PPH8 454 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 BET1O15155 118 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 F12P00748 615 aaPredicted RBP13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 SFTPBP07988 381 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 B4GALT1P15291 398 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 ADCYAP1P18509 176 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PTGER4P35408 488 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 SSR4P51571 173 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PLEKHN1Q494U1 663 aaPredicted RBP13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 CHRFAM7AQ494W8 412 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PMS2CLQ68D20 193 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 ZNF774Q6NX45 483 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 OPN5Q6U736 354 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 SGK3Q96BR1 496 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PHYHIPLQ96FC7 376 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 S100A13Q99584 98 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 FOXD3Q9UJU5 478 aaPredicted RBP13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 FAM221AA4D161 298 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 KLK3P07288 261 aaPredicted RBP13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 TMEM225BP0DP42 221 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 OPRM1P35372 400 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 THBS4P35443 961 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 RIPPLY1Q0D2K3 151 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PDCD1Q15116 288 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 TAF9Q16594 264 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 PLXDC2Q6UX71 529 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 AKR7LQ8NHP1 331 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 HAS2Q92819 552 aa13.6□□□□□ -0.23
TMEM50A-201ENST00000374358 ANGPTL4Q9BY76 406 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms