RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZDHHC22Q8N966 263 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 C1orf162Q8NEQ5 155 aaPredicted RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 DEFB127Q9H1M4 99 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 FN3KRPQ9HA64 309 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF816-ZNF321PA0A0X1KG74 233 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 A0A1B0GWJ7 208 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 SERPINE3A8MV23 424 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 RRP8O43159 456 aaKnown RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 HCKP08631 526 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 RTL6Q6ICC9 239 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 PEG10Q86TG7 708 aaKnown RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 HOGA1Q86XE5 327 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 WNT2BQ93097 391 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 PHF21AQ96BD5 680 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 GPR137Q96N19 417 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 SPACA5Q96QH8 159 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 SLC6A7Q99884 636 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 MED12LQ86YW9 2145 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 A0A1W2PP11 408 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 CGAP01215 116 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 GNB3P16520 340 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF24P17028 368 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 NOVA1P51513 510 aaKnown RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 FUT6P51993 359 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 PMP22Q01453 160 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 ACTBL2Q562R1 376 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 ASCL5Q7RTU5 278 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 TRAPPC6BQ86SZ2 158 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 APOBEC3DQ96AK3 386 aaPredicted RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 HYLS1Q96M11 299 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 TAAR6Q96RI8 345 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 TMPRSS13Q9BYE2 586 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF436Q9C0F3 470 aaPredicted RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 TINAGL1Q9GZM7 467 aaPredicted RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 TP63Q9H3D4 680 aaPredicted RBP10.86□□□□□ -0.67
PRPF4-202ENST00000374199 DKK4Q9UBT3 224 aa10.86□□□□□ -0.67
PRPF4-202ENST00000374199 IGKV1-12A0A0C4DH73 117 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF736B4DX44 427 aaPredicted RBP10.85□□□□□ -0.67
PRPF4-202ENST00000374199 WISP2O76076 250 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 IGKV1D-12P01611 117 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 ANXA3P12429 323 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 MGMTP16455 207 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 CCL11P51671 97 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 ARL6IP1Q15041 203 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 RSPO4Q2I0M5 234 aaPredicted RBP10.85□□□□□ -0.67
PRPF4-202ENST00000374199 TMEM200AQ86VY9 491 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 RAB3CQ96E17 227 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 PECRQ9BY49 303 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 SLA2Q9H6Q3 261 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A10PA6NDY2 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A18PA6NE21 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A16PA6NEW6 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A20PA6NIJ5 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A8PA6NJQ4 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A7PA6NKC0 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A22PA8MWA6 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A12PA8MX19 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A5PA8MXJ8 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A23PA8MXZ1 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A15PP0C7V4 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A13PP0C7W8 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A14PP0C7W9 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 FAM90A24PP0C7X0 464 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 EIF2S3P41091 472 aaKnown RBP10.85□□□□□ -0.67
PRPF4-202ENST00000374199 WNT5AP41221 380 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 COMMD2Q86X83 199 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 WBP1Q96G27 269 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 URM1Q9BTM9 101 aaKnown RBP10.85□□□□□ -0.67
PRPF4-202ENST00000374199 POFUT1Q9H488 388 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 RANBP3Q9H6Z4 567 aaPredicted RBP10.85□□□□□ -0.67
PRPF4-202ENST00000374199 SCP2D1Q9UJQ7 156 aa10.85□□□□□ -0.67
PRPF4-202ENST00000374199 PRSS44E7EML9 344 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF780AO75290 641 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 RAB3DO95716 219 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 CYB5AP00167 134 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 NRASP01111 189 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 LCATP04180 440 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 GIPP09681 153 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ANXA7P20073 488 aaKnown RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 SRSF7Q16629 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ATPAF1Q5TC12 328 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 FBXW5Q969U6 566 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 PRRT1Q99946 306 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 GON7Q9BXV9 100 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 BEX2Q9BXY8 128 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 MGAT4CQ9UBM8 478 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ITGB1BP2Q9UKP3 347 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 AHCTF1Q8WYP5 2266 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF169Q14929 603 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 ZNF782Q6ZMW2 699 aaPredicted RBP10.84□□□□□ -0.67
PRPF4-202ENST00000374199 Q6ZS49 121 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 Q6ZT83 130 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 FAM214BQ7L5A3 538 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
PRPF4-202ENST00000374199 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms