RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CHST5Q9GZS9 411 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 CST11Q9H112 138 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 EXO5Q9H790 373 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 ZNF703Q9H7S9 590 aaPredicted RBP12.28□□□□□ -0.44
LDB3-204ENST00000372066 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 PLEKHA6Q9Y2H5 1048 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 SVILO95425 2214 aa12.28□□□□□ -0.44
LDB3-204ENST00000372066 OR5H15A6NDH6 313 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 TMEM235A6NFC5 223 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 OR6C65A6NJZ3 312 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 NEURL1O76050 574 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 AMY2AP04746 511 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 RLN1P04808 185 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 CBX5P45973 191 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 MOGAT2Q3SYC2 334 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 CDNFQ49AH0 187 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 ACTBL2Q562R1 376 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 RNASE10Q5GAN6 216 aaKnown RBP12.27□□□□□ -0.44
LDB3-204ENST00000372066 OR10K2Q6IF99 312 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 NLRC3Q7RTR2 1065 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 MRGPRGQ86SM5 289 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 LRRC18Q8N456 261 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 OR56B1Q8NGI3 324 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 OR4D10Q8NGI6 311 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 NKX3-1Q99801 234 aaPredicted RBP12.27□□□□□ -0.44
LDB3-204ENST00000372066 TMEM59Q9BXS4 323 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 TMPRSS13Q9BYE2 586 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 LINC00470Q9BZP3 86 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 IFT46Q9NQC8 304 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.44
LDB3-204ENST00000372066 SH3BGRL2Q9UJC5 107 aa12.27□□□□□ -0.44
LDB3-204ENST00000372066 KLF2Q9Y5W3 355 aaPredicted RBP12.27□□□□□ -0.44
LDB3-204ENST00000372066 LRBAP50851 2863 aa12.27□□□□□ -0.45
LDB3-204ENST00000372066 ABCA12Q86UK0 2595 aa12.27□□□□□ -0.45
LDB3-204ENST00000372066 TMEM82A0PJX8 343 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 MEIS3P1A6NDR6 274 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 F5H5K5 113 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 SYNGR3O43761 229 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CDC14BO60729 498 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 RGS11O94810 467 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 TPOP07202 933 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 VSIG10L2P0DP72 767 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 RBPJQ06330 500 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 RTL6Q6ICC9 239 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 TRAPPC6BQ86SZ2 158 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 BPIFB2Q8N4F0 458 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ZDHHC22Q8N966 263 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CHST4Q8NCG5 386 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 OR2T35Q8NGX2 323 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CCDC120Q96HB5 630 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 MS4A3Q96HJ5 214 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 LYZL4Q96KX0 146 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
LDB3-204ENST00000372066 GPER1Q99527 375 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 FOXB1Q99853 325 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 RGCCQ9H4X1 137 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 RNF122Q9H9V4 155 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CRLF2Q9HC73 371 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ANAPC10Q9UM13 185 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
LDB3-204ENST00000372066 PINLYPA6NC86 204 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 OR6C6A6NF89 314 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ZNF735P0CB33 412 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ZNF24P17028 368 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CA7P43166 264 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CASP6P55212 293 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 IDO2Q6ZQW0 420 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 CHMP1BQ7LBR1 199 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 NAA40Q86UY6 237 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 SLC7A5P1Q8MH63 180 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ZNF808Q8N4W9 903 aaPredicted RBP12.26□□□□□ -0.45
LDB3-204ENST00000372066 STEAP2Q8NFT2 490 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 OR8S1Q8NH09 359 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 OR1F12Q8NHA8 337 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ROBO4Q8WZ75 1007 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 PARPBPQ9NWS1 579 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 TIMM10BQ9Y5J6 103 aa12.26□□□□□ -0.45
LDB3-204ENST00000372066 ZGRF1Q86YA3 2104 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 IGKV1-9A0A0C4DH69 117 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 H3BUI4 141 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 FARS2O95363 451 aaKnown RBP12.25□□□□□ -0.45
LDB3-204ENST00000372066 SYNGR4O95473 234 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 MPIG6BO95866 241 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 NAT2P11245 290 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 OR3A4PP47883 348 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 CLDN15P56746 228 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 GNG2P59768 71 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 PMP22Q01453 160 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 OR1C1Q15619 314 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 KISS1Q15726 138 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 HYAL4Q2M3T9 481 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 RSPO1Q2MKA7 263 aaPredicted RBP12.25□□□□□ -0.45
LDB3-204ENST00000372066 GFOD2Q3B7J2 385 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 SPINK14Q6IE38 97 aa12.25□□□□□ -0.45
LDB3-204ENST00000372066 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms