RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 REC114Q7Z4M0 266 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SLC17A5Q9NRA2 495 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 ST8SIA5O15466 376 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SEMG1P04279 462 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 CD70P32970 193 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 NMUP48645 174 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 GNG10P50151 68 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 TPBGQ13641 420 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SLC25A35Q3KQZ1 300 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 LAIR1Q6GTX8 287 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 Q6ZSR9 355 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 D2HGDHQ8N465 521 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 FBXO17Q96EF6 278 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 WDFY2Q96P53 400 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SLC25A22Q9H936 323 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 COX6CP09669 75 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 SLC37A1P57057 533 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 PCBP3P57721 371 aaKnown RBP13.82□□□□□ -0.2
COL5A1-201ENST00000371817 NUBPLQ8TB37 319 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 CPEB1Q9BZB8 566 aaKnown RBP13.82□□□□□ -0.2
COL5A1-201ENST00000371817 OR51B4Q9Y5P0 310 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 KIR2DS5A0A0G2JLQ3 304 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 A0A0G2JNG1 304 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 KIR2DS3K7RE56 304 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 KIR2DS5Q14953 304 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 BATF2Q8N1L9 274 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 OR51E1Q8TCB6 317 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 ACY3Q96HD9 319 aa13.82□□□□□ -0.2
COL5A1-201ENST00000371817 ONECUT2O95948 504 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 CRHP06850 196 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 DAOP14920 347 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 GALP22466 123 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 PAFAH1B2P68402 229 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 OR2A5Q96R48 311 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 TMEM230Q96A57 120 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 SLC22A13Q9Y226 551 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 APCSP02743 223 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 ICAM2P13598 275 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF816Q0VGE8 651 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 MYOZ3Q8TDC0 251 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 ST6GAL2Q96JF0 529 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 R4GMQ9 66 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 CYBAP13498 195 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 ERV3-1Q14264 604 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 CSF3RQ99062 836 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 AMMECR1LQ6DCA0 310 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 LCORQ96JN0 433 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 FGF20Q9NP95 211 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 RASL12Q9NYN1 266 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 HAND1O96004 215 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 MBPP02686 304 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 CSN3P07498 182 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 FKBP2P26885 142 aaKnown RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 UBTD2Q8WUN7 234 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 SLAMF6Q96DU3 332 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 PTRH2Q9Y3E5 179 aaKnown RBP13.81□□□□□ -0.2
COL5A1-201ENST00000371817 DMRT1Q9Y5R6 373 aa13.81□□□□□ -0.2
COL5A1-201ENST00000371817 NUDT3O95989 172 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF77Q15935 545 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 C9orf62Q8N4C0 152 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 OR4B1Q8NGF8 309 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 FBXO4Q9UKT5 387 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 AMDHD2Q9Y303 409 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 ANKRD34CP0C6C1 535 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 AGFG1P52594 562 aaKnown RBP13.8□□□□□ -0.2
COL5A1-201ENST00000371817 IL13RA2Q14627 380 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 SPACA5Q96QH8 159 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 ST3GAL6Q9Y274 331 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 HINT1P49773 126 aaPredicted RBP13.8□□□□□ -0.2
COL5A1-201ENST00000371817 KLRB1Q12918 225 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 PRR14Q9BWN1 585 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 SPTBN2O15020 2390 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 SLC2A10O95528 541 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 SLC38A11Q08AI6 406 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 C1orf140Q5VVS0 124 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 DMRTA1Q5VZB9 504 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 PTP4A1Q93096 173 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 FBXL17Q9UF56 701 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 PRSS21Q9Y6M0 314 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 C11orf94C9JXX5 98 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 CCR2P41597 374 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 TAS2R60P59551 318 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 PDE6DO43924 150 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 ZNF250P15622 560 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 PSMB5P28074 263 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 SEZ6L2Q6UXD5 910 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 TOE1Q96GM8 510 aaKnown RBP13.8□□□□□ -0.2
COL5A1-201ENST00000371817 LRRC3BQ96PB8 259 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 UFC1Q9Y3C8 167 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 C10orf126Q8N4M7 172 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 SLC25A19Q9HC21 320 aa13.8□□□□□ -0.2
COL5A1-201ENST00000371817 LAMB1P07942 1786 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 OR2W5A6NFC9 320 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 WNT1P04628 370 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 BTF3P20290 206 aaKnown RBP13.79□□□□□ -0.2
COL5A1-201ENST00000371817 CD40P25942 277 aa13.79□□□□□ -0.2
COL5A1-201ENST00000371817 PPP1R1AQ13522 171 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms