RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TBC1D28Q2M2D7 210 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TMEM215Q68D42 235 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TMEM37Q8WXS4 190 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 ELSPBP1Q96BH3 223 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 EDEM2Q9BV94 578 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 TPPP2P59282 170 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 MOGAT1Q96PD6 335 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 NRTNQ99748 197 aa14.25□□□□□ -0.13
COL17A1-202ENST00000369733 SLC25A6P12236 298 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 OR3A4PP47883 348 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 VPS25Q9BRG1 176 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 PRR13Q9NZ81 148 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 MIOXQ9UGB7 285 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 UBE2L5PA0A1B0GUS4 154 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 CLEC18AA5D8T8 446 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 EPPINO95925 133 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 ANKRD34CP0C6C1 535 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 DAOP14920 347 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 KRTDAPP60985 99 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF273Q14593 569 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 MLF2Q15773 248 aaPredicted RBP14.24□□□□□ -0.13
COL17A1-202ENST00000369733 CLEC18CQ8NCF0 446 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 NPEPL1Q8NDH3 523 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 APH1AQ96BI3 265 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 MVB12AQ96EY5 273 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 CHST6Q9GZX3 395 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF732B4DXR9 585 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 SEC14L6B5MCN3 397 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 DHHO43323 396 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 NMBP08949 121 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 OR10J4P0C629 311 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 CD200P41217 278 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 HAAOP46952 286 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 SLC25A42Q86VD7 318 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 OR5C1Q8NGR4 320 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 FLRT3Q9NZU0 649 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 SLC25A4P12235 298 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 FABP6P51161 128 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 LIMK1P53667 647 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 GFERP55789 205 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF141Q15928 474 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF770Q6IQ21 691 aaPredicted RBP14.24□□□□□ -0.13
COL17A1-202ENST00000369733 CLEC18BQ6UXF7 455 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 UBE3DQ7Z6J8 389 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 CDC20BQ86Y33 519 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 PARD6AQ9NPB6 346 aa14.24□□□□□ -0.13
COL17A1-202ENST00000369733 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
COL17A1-202ENST00000369733 CT62P0C5K7 136 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 CD46P15529 392 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 PTGFRP43088 359 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 CSRP3P50461 194 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 UBE2G2P60604 165 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 DEGS2Q6QHC5 323 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 RPS19BP1Q86WX3 136 aaKnown RBP14.23□□□□□ -0.13
COL17A1-202ENST00000369733 C8orf44Q96CB5 159 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 OR2A5Q96R48 311 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 TPPP3Q9BW30 176 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 C12orf49Q9H741 205 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 RASL12Q9NYN1 266 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 MYOGP15173 224 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 SUMO3P55854 103 aaPredicted RBP14.23□□□□□ -0.13
COL17A1-202ENST00000369733 PPP1CBP62140 327 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 TIGITQ495A1 244 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 VN1R4Q7Z5H5 301 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 ERGIC1Q969X5 290 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 LANCL2Q9NS86 450 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 TRAPPC1Q9Y5R8 145 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 XKRY2A2RUG3 117 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 FAM24AA6NFZ4 105 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 FUT6P51993 359 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 C9orf152Q5JTZ5 239 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 FBXL14Q8N1E6 418 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 NAA60Q9H7X0 242 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 MRPS2Q9Y399 296 aaKnown RBP14.23□□□□□ -0.13
COL17A1-202ENST00000369733 C5orf49A4QMS7 147 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 CXCL10P02778 98 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 MPGP29372 298 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 GALR1P47211 349 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF92Q03936 586 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 IL13RA2Q14627 380 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 ANKRD33Q7Z3H0 272 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 CIB3Q96Q77 187 aaPredicted RBP14.23□□□□□ -0.13
COL17A1-202ENST00000369733 ST6GALNAC2Q9UJ37 374 aa14.23□□□□□ -0.13
COL17A1-202ENST00000369733 SH2D1BO14796 132 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 TRAF3IP2O43734 574 aaPredicted RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 TMEM267Q0VDI3 215 aaPredicted RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 VHLLQ6RSH7 139 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 C6orf201Q7Z4U5 140 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 SHARPINQ9H0F6 387 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 NINQ8N4C6 2090 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 C7orf77A4D0Y5 90 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 TMIGD3P0DMS9 266 aaPredicted RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 SSX7Q7RTT5 188 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 ZNF573Q86YE8 665 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 PINX1Q96BK5 328 aaKnown RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 RIMS4Q9H426 269 aaPredicted RBP14.22□□□□□ -0.13
COL17A1-202ENST00000369733 C4orf47A7E2U8 309 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 ADAM20O43506 726 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 CTLA4P16410 223 aa14.22□□□□□ -0.13
COL17A1-202ENST00000369733 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms