RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SPNP16150 400 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 SIGLEC14Q08ET2 396 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 TMEM267Q0VDI3 215 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-207ENST00000368226 CD226Q15762 336 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 FOXB2Q5VYV0 432 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 LYG1Q8N1E2 194 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 LRRC29Q8WV35 223 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 RBPMSQ93062 196 aaKnown RBP11.51□□□□□ -0.57
PTPRK-207ENST00000368226 CLDN23Q96B33 292 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 MOB3AQ96BX8 217 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 TAAR6Q96RI8 345 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 TXN2Q99757 166 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 SLC26A1Q9H2B4 701 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 FGF7P21781 194 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 PXDC1Q5TGL8 231 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 RPL7L1Q6DKI1 246 aaKnown RBP11.51□□□□□ -0.57
PTPRK-207ENST00000368226 C6orf201Q7Z4U5 140 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 MRGPREQ86SM8 312 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 TUSC5Q8IXB3 177 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 MITD1Q8WV92 249 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 PELI1Q96FA3 418 aa11.51□□□□□ -0.57
PTPRK-207ENST00000368226 WNT1P04628 370 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 TNFRSF1AP19438 455 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 KIR2DL1P43626 348 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-207ENST00000368226 TNFAIP6P98066 277 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-207ENST00000368226 ASAH1Q13510 395 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 TMEFF2Q9UIK5 374 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-207ENST00000368226 EPPINO95925 133 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 NGFP01138 241 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 KISS1Q15726 138 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 LINC00303Q3SY05 128 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 TMEM272A0A1B0GTI8 110 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 TMEM30CPA0ZSE6 113 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 CST7O76096 145 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 HFEQ30201 348 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 C12orf73Q69YU5 71 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 TM4SF19Q96DZ7 209 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 RASL10BQ96S79 203 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
PTPRK-207ENST00000368226 FLRT3Q9NZU0 649 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 FAM157AC9JC47 383 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 PLPP3O14495 311 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 CDC42EP2O14613 210 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 AKR7A2O43488 359 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 ZBTB25P24278 435 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 PPP1CBP62140 327 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 C14orf79Q96F83 325 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 SLC25A32Q9H2D1 315 aa11.5□□□□□ -0.57
PTPRK-207ENST00000368226 CTLA4P16410 223 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 PSMB6P28072 239 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 AVPR2P30518 371 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 RHBDD2Q6NTF9 364 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 SIRT3Q9NTG7 399 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-207ENST00000368226 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 FCGR3BO75015 233 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 GIPP09681 153 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CT45A10P0DMU9 189 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 GNG3P63215 75 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 BTNL3Q6UXE8 466 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 MRPS18BQ9Y676 258 aaKnown RBP11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CLEC18AA5D8T8 446 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CRYBA1P05813 215 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 ABI3BPQ7Z7G0 1075 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CLEC18CQ8NCF0 446 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 ZNF416Q9BWM5 594 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 IL20Q9NYY1 176 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CCL3P10147 92 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CD80P33681 288 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 DDOSTP39656 456 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 BTG1P62324 171 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 Q56UQ5 140 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 ADGRG3Q86Y34 549 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 LRFN3Q9BTN0 628 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CLCF1Q9UBD9 225 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 PNLIPP16233 465 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 TMPRSS11FQ6ZWK6 438 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 MRGPRDQ8TDS7 321 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 C2CD4CQ8TF44 421 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 ADGRL4Q9HBW9 690 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 CLEC5AQ9NY25 188 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-207ENST00000368226 DOCK5Q9H7D0 1870 aa11.49□□□□□ -0.57
PTPRK-207ENST00000368226 SRP14P37108 136 aaKnown RBP11.48□□□□□ -0.57
PTPRK-207ENST00000368226 OR5I1Q13606 314 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 TIGD3Q6B0B8 471 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 LYG2Q86SG7 212 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 RXFP4Q8TDU9 374 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 TRIP11Q15643 1979 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 AQP8O94778 261 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 CDK5Q00535 292 aa11.48□□□□□ -0.57
PTPRK-207ENST00000368226 CREB3L2Q70SY1 520 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms