RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 HDGFL3Q9Y3E1 203 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF205O95201 554 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ELAVL4P26378 380 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NKX2-1P43699 371 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 RAB32Q13637 225 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CENPVQ7Z7K6 275 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ABHD17AQ96GS6 310 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GPR87Q9BY21 358 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CHST5Q9GZS9 411 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NKX2-4Q9H2Z4 354 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SMIM28A0A1B0GU29 152 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 C1QL1O75973 258 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 DANCRP0C864 163 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF888P0CJ79 500 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SLC10A2Q12908 348 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ACVR1CQ8NER5 493 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR2AK2Q8NG84 335 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PDE4DIPQ5VU43 2346 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 TCRBV5S1A1TA0A578 114 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ALDOCP09972 364 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SPANXN4Q5MJ08 99 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SYPL2Q5VXT5 272 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CST9Q5W186 159 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 C12orf73Q69YU5 71 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GPR62Q9BZJ7 368 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PARLQ9H300 379 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR51B2Q9Y5P1 312 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ERV3-1Q14264 604 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR2T2Q6IF00 324 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SPRED2Q7Z698 418 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 LRTM2Q8N967 370 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ACOT4Q8N9L9 421 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF583Q96ND8 569 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 LSM5Q9Y4Y9 91 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SMPD2O60906 423 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF860A6NHJ4 632 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 DPPA4Q7L190 304 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PRSS45Q7RTY3 260 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR1L1Q8NH94 360 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CNIH3Q8TBE1 160 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NARFLQ9H6Q4 476 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF552Q9H707 407 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PIK3C2AO00443 1686 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 MYH1P12882 1939 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 A6NNC1 897 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 HIKESHIQ53FT3 197 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 AADACL3Q5VUY0 350 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF813Q6ZN06 617 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CLEC1AQ8NC01 280 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR5AK3PQ8NH89 298 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 R3HDMLQ9H3Y0 253 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PRDM13Q9H4Q3 707 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 HS3ST1O14792 307 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SPINT2O43291 252 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CEACAM6P40199 344 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PRRT3Q5FWE3 981 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CYB561A3Q8NBI2 242 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ABHD4Q8TB40 342 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PARM1Q6UWI2 310 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 METTL12A8MUP2 240 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 FOXA1P55317 472 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 TMEFF1Q8IYR6 380 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF701Q9NV72 531 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 C2orf42Q9NWW7 574 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SERTAD3Q9UJW9 196 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PGPEP1LA6NFU8 196 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CXCL8P10145 99 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 FUT7Q11130 342 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GGNBP1Q5YKI7 109 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 MRPL21Q7Z2W9 205 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 MRPL32Q9BYC8 188 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 TGIF2Q9GZN2 237 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NPEPPSL1A6NEC2 478 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 TCN2P20062 427 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CST5P28325 142 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NR0B2Q15466 257 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 FAM57BQ71RH2 274 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GPR82Q96P67 336 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CD300LBA8K4G0 201 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 LOC730098B7Z3J9 87 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 AQP7O14520 342 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CPMP14384 443 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PDE6GP18545 87 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 TESK1Q15569 626 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 PKDCCQ504Y2 493 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NCR3LG1Q68D85 454 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SLC25A42Q86VD7 318 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 GPR35Q9HC97 309 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZMIZ1Q9ULJ6 1067 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 RBM7Q9Y580 266 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 LRRC30A6NM36 301 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 NAA10P41227 235 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 LSM6P62312 80 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 MED25Q71SY5 747 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 OR2T10Q8NGZ9 312 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ERGIC1Q969X5 290 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 SOX7Q9BT81 388 aa3.38□□□□□ -1.87
SYNE1-207ENST00000367255 CHD2O14647 1828 aaKnown RBP3.38□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF195O14628 629 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms