RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 RAB40CQ96S21 281 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 SLC25A22Q9H936 323 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 ZNF253O75346 499 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 OR5AU1Q8NGC0 362 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 OR6C1Q96RD1 312 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 HDAC8Q9BY41 377 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 CHST6Q9GZX3 395 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 FGF21Q9NSA1 209 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 PAM16Q9Y3D7 125 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 IGHV3-20A0A0C4DH32 117 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 HRASP01112 189 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 KRASP01116 189 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 GP1BAP07359 652 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 FGF13Q92913 245 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 SMIM12Q96EX1 92 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 PELI1Q96FA3 418 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 NEIL1Q96FI4 390 aaPredicted RBP12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 PITPNC1Q9UKF7 332 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 LRP12Q9Y561 859 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 FAM87AP0C7U9 286 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 HIST1H1DP16402 221 aaKnown RBP12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 FAHP16930 419 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 HLA-DRB5Q30154 266 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 TMEM52BQ4KMG9 183 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 KIRREL2Q6UWL6 708 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 ABI3BPQ7Z7G0 1075 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 OTOSQ8NHW6 89 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 RHBDD1Q8TEB9 315 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 ZC3HAV1LQ96H79 300 aaKnown RBP12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 PCDHGA9Q9Y5G4 932 aaKnown RBP12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 NEURL1O76050 574 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 RPL7P18124 248 aaKnown RBP12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 SHHQ15465 462 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 COL5A1-AS1Q5SY13 56 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 WFDC5Q8TCV5 224 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 ARHGAP5-AS1Q96IT6 56 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 FUT9Q9Y231 359 aa12.06□□□□□ -0.48
CCDC144A-203ENST00000360495 IFT172Q9UG01 1749 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 TLCD2A6NGC4 264 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 ICOSLGO75144 302 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 PRR35P0CG20 571 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 NKAIN2Q5VXU1 208 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 ZDHHC23Q8IYP9 409 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 OR10X1Q8NGY0 326 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 NAT6Q93015 286 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 NGBQ9NPG2 151 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 B4DEV8 164 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 K7ESM1 405 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 CD99P14209 185 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 PCP4P48539 62 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 TUSC1Q2TAM9 212 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 FBXO17Q96EF6 278 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 FAAP24Q9BTP7 215 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 C5orf49A4QMS7 147 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 ALOX12BO75342 701 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 HPP00738 406 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 GJA4P35212 333 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 THBS4P35443 961 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 PTGFRP43088 359 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 TMEM251Q8N6I4 163 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 BADQ92934 168 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 ANAPC16Q96DE5 110 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 RNF24Q9Y225 148 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 PARP4Q9UKK3 1724 aaKnown RBP12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 A6NDN8 102 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 ZFPL1O95159 310 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 BMP5P22003 454 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 CAMPP49913 170 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 BTG2P78543 158 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 HIST3H3Q16695 136 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 PYCR3Q53H96 274 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 WDR38Q5JTN6 314 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 FAM219BQ5XKK7 198 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 MCHR2Q969V1 340 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 SIRT7Q9NRC8 400 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 EXOGQ9Y2C4 368 aaKnown RBP12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 SIGLEC1Q9BZZ2 1709 aa12.05□□□□□ -0.48
CCDC144A-203ENST00000360495 IGHEP01854 428 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 IGHA2P01877 340 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 DHRS13Q6UX07 377 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 OR5D13Q8NGL4 314 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 ROBO4Q8WZ75 1007 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 MRPS24Q96EL2 167 aaKnown RBP12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 MENTQ9BUN1 341 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 PRSS50Q9UI38 385 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 C5orf52A6NGY3 159 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 HPXP02790 462 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 SUCLG1P53597 346 aaKnown RBP12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 OPN4Q9UHM6 478 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 CCL26Q9Y258 94 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 ADAP1O75689 374 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 SCAND1P57086 179 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 CLN3Q13286 438 aa12.04□□□□□ -0.48
CCDC144A-203ENST00000360495 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms