RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 Q6ZN92 141 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 SYS1Q8N2H4 156 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 KCNE4Q8WWG9 221 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 EXTL1Q92935 676 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 ALKBH3Q96Q83 286 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-203ENST00000359759 VN1R1Q9GZP7 353 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 ZBP1Q9H171 429 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 RGPD8O14715 1765 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-203ENST00000359759 FCGR3BO75015 233 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 CEBPDP49716 269 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-203ENST00000359759 TAAR9Q96RI9 348 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 POMT2Q9UKY4 750 aa14.42□□□□□ -0.1
COL18A1-203ENST00000359759 IGHV3-13P01766 116 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 IGHV3-7P01780 117 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 TCTN3Q6NUS6 607 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.41□□□□□ -0.1
COL18A1-203ENST00000359759 UFC1Q9Y3C8 167 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 LAMB4A4D0S4 1761 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 TRGV8A0A0C4DH27 118 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 POU2F2P09086 479 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 B2MP61769 119 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 NCMAPQ5T1S8 102 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 SLC35E4Q6ICL7 350 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 DEFB123Q8N688 67 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 CMTM3Q96MX0 182 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 WASHC3Q9Y3C0 194 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 J3KRW8 73 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 FZD2Q14332 565 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 KCNE3Q9Y6H6 103 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 IGHV3-43A0A0B4J1X8 118 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 M0R2Z0 102 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 VAMP5O95183 116 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 IGHV3-43DP0DP04 118 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 TMEM241Q24JQ0 296 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 OR4A4PQ8NGN8 299 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 TMEM147Q9BVK8 224 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 B9D1Q9UPM9 204 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 SLC22A20A6NK97 555 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 FKBP2P26885 142 aaKnown RBP14.41□□□□□ -0.1
COL18A1-203ENST00000359759 FUT6P51993 359 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 TCTAP57738 103 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 BAHD1Q8TBE0 780 aaPredicted RBP14.41□□□□□ -0.1
COL18A1-203ENST00000359759 CA5BP1Q8WTZ4 195 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 AKAP12Q02952 1782 aa14.41□□□□□ -0.1
COL18A1-203ENST00000359759 GFYI3L273 518 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 SMIM21Q3B7S5 101 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 NHLRC1Q6VVB1 395 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 DUSP18Q8NEJ0 188 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 ADAT1Q9BUB4 502 aaKnown RBP14.4□□□□□ -0.1
COL18A1-203ENST00000359759 TARM1B6A8C7 271 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 RHOBP62745 196 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 KIRREL2Q6UWL6 708 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 VN1R2Q8NFZ6 395 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 CST2P09228 141 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 SLC38A11Q08AI6 406 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 BSGP35613 385 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 UQCC3Q6UW78 93 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 MORN4Q8NDC4 146 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 OR4F17Q8NGA8 305 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 OR5C1Q8NGR4 320 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 ARHGAP5-AS1Q96IT6 56 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 KLF13Q9Y2Y9 288 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-203ENST00000359759 IGLV3-10A0A075B6K4 115 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 TUBAL3A6NHL2 446 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 G6PCP35575 357 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 PPICP45877 212 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 HLXQ14774 488 aaPredicted RBP14.4□□□□□ -0.1
COL18A1-203ENST00000359759 BTNL3Q6UXE8 466 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 TCTEX1D1Q8N7M0 179 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 FBXO17Q96EF6 278 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 ABHD14AQ9BUJ0 271 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 IL21Q9HBE4 155 aa14.4□□□□□ -0.1
COL18A1-203ENST00000359759 ETFBKMTQ8IXQ9 262 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 SMIM4Q8WVI0 70 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 DYRK2Q92630 601 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 UQCC1Q9NVA1 299 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 PRR13Q9NZ81 148 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 SPINK2P20155 84 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 KTI12Q96EK9 354 aaPredicted RBP14.39□□□□□ -0.11
COL18A1-203ENST00000359759 SCMH1Q96GD3 660 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 SULT1A1P50225 295 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 PTOV1Q86YD1 416 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 FGF20Q9NP95 211 aaPredicted RBP14.39□□□□□ -0.11
COL18A1-203ENST00000359759 LRP6O75581 1613 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 FAM24AA6NFZ4 105 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 EDARADDQ8WWZ3 215 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 WBP2Q969T9 261 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 PRRX2Q99811 253 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 LYRM2Q9NU23 88 aaPredicted RBP14.39□□□□□ -0.11
COL18A1-203ENST00000359759 BET1LQ9NYM9 111 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 WSB1Q9Y6I7 421 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 TRAV1-2A0A0B4J238 106 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 TMEM30CPA0ZSE6 113 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 LY86O95711 162 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 FPR2P25090 351 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 CD40P25942 277 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 LPAR6P43657 344 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 PNLIPRP3Q17RR3 467 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 FAAP24Q9BTP7 215 aa14.39□□□□□ -0.11
COL18A1-203ENST00000359759 ZMIZ1Q9ULJ6 1067 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms