RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 KCNK15Q9H427 330 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 URB1O60287 2271 aaKnown RBP11.57□□□□□ -0.56
SMC4-202ENST00000357388 BTG2P78543 158 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 FZD2Q14332 565 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 DEFB109BQ30KR1 87 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 AWAT1Q58HT5 328 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 CALHM3Q86XJ0 350 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 BCORP1Q8N888 145 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 MS4A6EQ96DS6 147 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 PRR14Q9BWN1 585 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 ST3GAL6Q9Y274 331 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 PCDHGA9Q9Y5G4 932 aaKnown RBP11.57□□□□□ -0.56
SMC4-202ENST00000357388 CD22P20273 847 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 CDC34P49427 236 aaPredicted RBP11.57□□□□□ -0.56
SMC4-202ENST00000357388 ACVR1Q04771 509 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 VMA21Q3ZAQ7 101 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 TRAT1Q6PIZ9 186 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 OR1L3Q8NH93 324 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 ZNF385DQ9H6B1 395 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 TMEM167BQ9NRX6 74 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 PEAK1Q9H792 1746 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 MYH6P13533 1939 aa11.57□□□□□ -0.56
SMC4-202ENST00000357388 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 SLC22A20A6NK97 555 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 GPANK1O95872 356 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 AVPR2P30518 371 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 YRDCQ86U90 279 aaKnown RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 RDH5Q92781 318 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 STARD4Q96DR4 205 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 DAPP1Q9UN19 280 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 IDSB3KWA1 339 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 M0R1B8 84 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 CST7O76096 145 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 ABLIM3O94929 683 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 TNFSF15O95150 251 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 ANKRD34CP0C6C1 535 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 OR2B11Q5JQS5 317 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 KLHDC9Q8NEP7 349 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 LRRC3BQ96PB8 259 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 ZNF391Q9UJN7 358 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 CCL26Q9Y258 94 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 FMN2Q9NZ56 1722 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 PRKRAO75569 313 aaKnown RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 SLC25A5P05141 298 aaKnown RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 GLI4P10075 376 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 NOVP48745 357 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 TCTN3Q6NUS6 607 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 ADPRHL1Q8NDY3 354 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 LOC102724200A0A096LPH7 203 aaPredicted RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 H0YIG0 161 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 CTDSPLO15194 276 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 FUT3P21217 361 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 IRS1P35568 1242 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 SLC6A12P48065 614 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 DHRS2Q13268 280 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 GPX7Q96SL4 187 aaPredicted RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 ZNF256Q9Y2P7 627 aaPredicted RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 MYH3P11055 1940 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 FGF2P09038 288 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 PPICP45877 212 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 SUMO3P55854 103 aaPredicted RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 SMIM21Q3B7S5 101 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 METRNLQ641Q3 311 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 NUFIP2Q7Z417 695 aaKnown RBP11.56□□□□□ -0.56
SMC4-202ENST00000357388 ZNF547Q8IVP9 402 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 BHLHE23Q8NDY6 225 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 OR10AD1Q8NGE0 317 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 TMEM147Q9BVK8 224 aa11.56□□□□□ -0.56
SMC4-202ENST00000357388 TMEM30CPA0ZSE6 113 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 ZNF98A6NK75 572 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 P2RY1P47900 373 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 PARM1Q6UWI2 310 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 OR5AS1Q8N127 324 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 MUC20Q8N307 709 aaPredicted RBP11.55□□□□□ -0.56
SMC4-202ENST00000357388 ZNF740Q8NDX6 193 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 SLC7A10Q9NS82 523 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 GFYI3L273 518 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 GSTZ1O43708 216 aaPredicted RBP11.55□□□□□ -0.56
SMC4-202ENST00000357388 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
SMC4-202ENST00000357388 NCMAPQ5T1S8 102 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
SMC4-202ENST00000357388 FDX2Q6P4F2 183 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 SPEM1Q8N4L4 309 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 ISG20L2Q9H9L3 353 aaKnown RBP11.55□□□□□ -0.56
SMC4-202ENST00000357388 OR3A1P47881 315 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 SURF2Q15527 256 aaPredicted RBP11.55□□□□□ -0.56
SMC4-202ENST00000357388 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 OR2C3Q8N628 320 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 OR5C1Q8NGR4 320 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 MRGPRX4Q96LA9 322 aa11.55□□□□□ -0.56
SMC4-202ENST00000357388 TINAGL1Q9GZM7 467 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms