RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SBK2P0C263 348 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 FUT7Q11130 342 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CD276Q5ZPR3 534 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CALHM3Q86XJ0 350 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR52N4Q8NGI2 321 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RND1Q92730 232 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CLDN23Q96B33 292 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NOL4LQ96MY1 436 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 DCAF16Q9NXF7 216 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 PCDHGA9Q9Y5G4 932 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 GOLGA4Q13439 2230 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CLEC18AA5D8T8 446 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 ALG1L2C9J202 215 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 FABP7O15540 132 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RAB5AP20339 215 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 Q6ZNB5 142 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SSX7Q7RTT5 188 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CLEC18CQ8NCF0 446 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SMIM7Q9BQ49 75 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SLC45A2Q9UMX9 530 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 FOXJ3Q9UPW0 622 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 MYO18AQ92614 2054 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TMEM235A6NFC5 223 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NUPL2O15504 423 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CDC14BO60729 498 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 IL5P05113 134 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NTF3P20783 257 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SUMO1P63165 101 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 IRF3Q14653 427 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 HAGHQ16775 308 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 C19orf48Q6RUI8 117 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 UBE3DQ7Z6J8 389 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RBM45Q8IUH3 476 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 DUSP18Q8NEJ0 188 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 PP6455Q8WZ26 134 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 MAP6Q96JE9 813 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 ZIC5Q96T25 663 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NIPSNAP1Q9BPW8 284 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CXXC4Q9H2H0 198 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RHOFQ9HBH0 211 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 C1RLQ9NZP8 487 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RCL1Q9Y2P8 373 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TRAV38-1A0A0B4J264 116 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CRXO43186 299 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TMEM127O75204 238 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 AQP8O94778 261 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 LCN15Q6UWW0 184 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 ANKRD37Q7Z713 158 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR4D10Q8NGI6 311 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 EXTL1Q92935 676 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NPAS1Q99742 590 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 PLA2G12AQ9BZM1 189 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 WSB2Q9NYS7 404 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 LRP3O75074 770 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 APEHP13798 732 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TMEM196Q5HYL7 178 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 Q6ZSR9 355 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR4S1Q8NGB4 309 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR5M8Q8NGP6 311 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RPUSD4Q96CM3 377 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CXorf58Q96LI9 332 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 DIRC2Q96SL1 478 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NUDT16L1Q9BRJ7 211 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 FAM221AA4D161 298 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 FITM1A5D6W6 292 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TOX3O15405 576 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 HOXB1P14653 301 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 ZNF17P17021 662 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR2B8PP59922 312 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 GNG3P63215 75 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 ACER2Q5QJU3 275 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 LYRM7Q5U5X0 104 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 LIPNQ5VXI9 398 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 DGAT2L7PQ6IED9 249 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NKAIN4Q8IVV8 208 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR52L2PQ8NGH6 319 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CYB5R1Q9UHQ9 305 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TEX50A0A1B0GTY4 177 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 ZNF727A8MUV8 499 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 RPL12P30050 165 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 HCCSP53701 268 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TUSC1Q2TAM9 212 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 WIPI1Q5MNZ9 446 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 EIF4E3Q8N5X7 224 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 NANOGP1Q8N7R0 232 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 AKR7LQ8NHP1 331 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CCL4L1Q8NHW4 92 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SLC25A46Q96AG3 418 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OR2A5Q96R48 311 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 URGCP-MRPS24S4R325 110 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SEMA7AO75326 666 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 SLC25A5P05141 298 aaKnown RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 CD1EP15812 388 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 HRH1P35367 487 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 PIGPP57054 158 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 TOMM34Q15785 309 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 B3GNTL1Q67FW5 361 aaPredicted RBP4.97□□□□□ -1.61
PTPRD-202ENST00000356435 Q6ZS52 159 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 OLIG3Q7RTU3 272 aa4.97□□□□□ -1.61
PTPRD-202ENST00000356435 BCDIN3DQ7Z5W3 292 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms