RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ERVS71-1P61550 626 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 NHLH1Q02575 133 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 NHLH2Q02577 135 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 IRF3Q14653 427 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 NSUN5P2Q63ZY6 315 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZDHHC23Q8IYP9 409 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 MANBALQ9NQG1 85 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 THAP10Q9P2Z0 257 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 K7ESM1 405 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 BMPR1BO00238 502 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 PAX5Q02548 391 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 IL24Q13007 206 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 SURF2Q15527 256 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 C16orf52Q8NHV5 167 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 NUBPLQ8TB37 319 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ESRP2Q9H6T0 727 aaKnown RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF552Q9H707 407 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 K7ERU9 68 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 BCAT2O15382 392 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ICOSLGO75144 302 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 DLK1P80370 383 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 IFITM3Q01628 133 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 EXT1Q16394 746 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 Q1RN00 199 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 DMKNQ6E0U4 476 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 LINC01465Q8N7H1 131 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 LINC00615Q96LM1 132 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 IL17BQ9UHF5 180 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ARR3P36575 388 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM3AP98173 230 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC25A26Q70HW3 274 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 LINC00518Q8N0U6 118 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 S1PR3Q99500 378 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ANGPTL4Q9BY76 406 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 WDR61Q9GZS3 305 aaKnown RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF275Q9NSD4 429 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ADAM20O43506 726 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 CHRNA7P36544 502 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 KLF9Q13886 244 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 C17orf99Q6UX52 265 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 RABEPKQ7Z6M1 372 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 TP53I13Q8NBR0 393 aaPredicted RBP11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 C17orf47Q8NEP4 570 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM191AQ9H0A3 160 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR51M1Q9H341 326 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF355PQ9NSJ1 428 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 MARCH5Q9NX47 278 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 MED29Q9NX70 200 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 LRRC30A6NM36 301 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 H3BNC9 293 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 HPXP02790 462 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 TIAL1Q01085 375 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 DHRS11Q6UWP2 260 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 ARHGAP5-AS1Q96IT6 56 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 PIAS2O75928 621 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 GNG4P50150 75 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 ASCL1P50553 236 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 RAE1P78406 368 aaKnown RBP11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM267Q0VDI3 215 aaPredicted RBP11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 UBE2V2Q15819 145 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 ATP6V1FQ16864 119 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 COL5A1-AS1Q5SY13 56 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 MRGPRX4Q96LA9 322 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 CCL26Q9Y258 94 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF835Q9Y2P0 537 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM24AA6NFZ4 105 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 LAMTOR5O43504 91 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZBTB25P24278 435 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM74A3Q4VXF1 159 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM26DQ5JW98 314 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 BAHD1Q8TBE0 780 aaPredicted RBP11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 NGBQ9NPG2 151 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 LIPGQ9Y5X9 500 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 ABLIM3O94929 683 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 C1QAP02745 245 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 STAG3L2P0CL84 134 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 PTGFRP43088 359 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 PNLIPRP2P54317 469 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 RPL24P83731 157 aaKnown RBP11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC25A30Q5SVS4 291 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 PWWP2BQ6NUJ5 590 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 HS3ST3A1Q9Y663 406 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 DMWDQ09019 674 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 VHLLQ6RSH7 139 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 MORN4Q8NDC4 146 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 AGBL5Q8NDL9 886 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 SMDT1Q9H4I9 107 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 OBP2AQ9NY56 170 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 PRSS50Q9UI38 385 aa11.41□□□□□ -0.58
SYNCRIP-201ENST00000355238 FRG2CA6NGY1 282 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 CRYM-AS1A6NIL9 109 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 CNIH1O95406 144 aa11.4□□□□□ -0.58
SYNCRIP-201ENST00000355238 TIMP1P01033 207 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms