RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 RBM7Q9Y580 266 aaKnown RBP9.44□□□□□ -0.9
CAPN3-203ENST00000349748 MRPS18BQ9Y676 258 aaKnown RBP9.44□□□□□ -0.9
CAPN3-203ENST00000349748 IGLV3-16A0A075B6K0 115 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 DCDC2BA2VCK2 349 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 STC2O76061 302 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 GZMHP20718 246 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 RABIFP47224 123 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ERVS71-1P61550 626 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 OR1Q1Q15612 314 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 C9orf50Q5SZB4 431 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 LDLRAD2Q5SZI1 272 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF684Q5T5D7 378 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 FBXO42Q6P3S6 717 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 FAM220AQ7Z4H9 259 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ZFP62Q8NB50 900 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-203ENST00000349748 LFNGQ8NES3 379 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 OR4C5Q8NGB2 326 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 CDS1Q92903 461 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 TECTBQ96PL2 329 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 COMMD4Q9H0A8 199 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 CKLFQ9UBR5 152 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 GTF2A1LQ9UNN4 478 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
CAPN3-203ENST00000349748 TRIOBPQ9H2D6 2365 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 ETV2O00321 342 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-203ENST00000349748 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
CAPN3-203ENST00000349748 ID2Q02363 134 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 ENDOGQ14249 297 aaKnown RBP9.43□□□□□ -0.9
CAPN3-203ENST00000349748 GGTLC2Q14390 218 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 MPV17LQ2QL34 196 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM176BQ3YBM2 270 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-203ENST00000349748 SPSB3Q6PJ21 355 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 UNQ5815/PRO19632Q6UWF5 114 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 OR52E1Q8NGJ3 308 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 PPP1R14AQ96A00 147 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 IL17FQ96PD4 163 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 MS4A10Q96PG2 267 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 SRD5A3Q9H8P0 318 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 ALPK2Q86TB3 2170 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 A0A1B0GW64 132 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 FEZF1A0PJY2 475 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 K7N7A8 449 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 TNFSF13O75888 250 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 CHRM2P08172 466 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 FPR2P25090 351 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 OR1D2P34982 312 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 FZD2Q14332 565 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 OR2I1PQ8NGU4 316 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 TNFRSF14Q92956 283 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 MCHR2Q969V1 340 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 C20orf144Q9BQM9 153 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF319Q9P2F9 582 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 MED31Q9Y3C7 131 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 HEATR5BQ9P2D3 2071 aa9.43□□□□□ -0.9
CAPN3-203ENST00000349748 A0A0A6YYH2 397 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 NPIPA5A0A0B4J1W7 369 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 A0A1B0GU03 582 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 A6NJ64 397 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 NPIPA7E9PJI5 369 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 NUPR1O60356 82 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 NPIPA8P0DM63 369 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 PDLIM4P50479 330 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 TAS2R31P59538 309 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ZP2Q05996 745 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 CST9LP1Q5W188 147 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ERASQ7Z444 233 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 FAM46BQ96A09 425 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 RASD2Q96D21 266 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ADAD1Q96M93 576 aaKnown RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 LPAR4Q99677 370 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 STRAPQ9Y3F4 350 aaKnown RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 CLDN16Q9Y5I7 305 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 BORCS7-ASMTA0A0B4J1R7 106 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 XRCC2O43543 280 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 DEDDO75618 318 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 FOLR1P15328 257 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 SLC6A6P31641 620 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 FHL1Q13642 323 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 OR5L2Q8NGL0 311 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 CORO2AQ92828 525 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 MS4A6EQ96DS6 147 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 OR8B4Q96RC9 309 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 NUDT9Q9BW91 350 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 VN1R3Q9BXE9 311 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 PLAGL1Q9UM63 463 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 GON4LQ3T8J9 2241 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF840PA6NDX5 716 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 LYPD3O95274 346 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 GNB3P16520 340 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 GLRA1P23415 457 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 P2RY1P47900 373 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 RAB11AP62491 216 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 METRNLQ641Q3 311 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 FAM166AQ6J272 317 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM123Q8N131 208 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms