RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SLC25A53Q5H9E4 307 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 PAQR4Q8N4S7 273 aaPredicted RBP12.19□□□□□ -0.46
TRIM4-201ENST00000349062 CLEC1AQ8NC01 280 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 PSMF1Q92530 271 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 PIGCQ92535 297 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 ARHGAP5-AS1Q96IT6 56 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 GLS2Q9UI32 602 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 NOSIPQ9Y314 301 aaKnown RBP12.19□□□□□ -0.46
TRIM4-201ENST00000349062 NPTNQ9Y639 398 aa12.19□□□□□ -0.46
TRIM4-201ENST00000349062 KANTRA0A1W2PQU2 76 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 TMEM82A0PJX8 343 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 NAP1L6A6NFF2 107 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 F5H0A9 414 aaPredicted RBP12.18□□□□□ -0.46
TRIM4-201ENST00000349062 GLAP06280 429 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 IGFBP3P17936 291 aaPredicted RBP12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ADH6P28332 368 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 NPY4RP50391 375 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DCAF10Q5QP82 559 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 FOXRED2Q8IWF2 684 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 SULF2Q8IWU5 870 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 OR5M9Q8NGP3 310 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DYRK2Q92630 601 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 TMEM9BQ9NQ34 198 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF581Q9P0T4 197 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF98A6NK75 572 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 HSPB6O14558 160 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 MRPL33O75394 65 aaKnown RBP12.18□□□□□ -0.46
TRIM4-201ENST00000349062 PMS2P2O95744 297 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 FGF2P09038 288 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 BLVRBP30043 206 aaPredicted RBP12.18□□□□□ -0.46
TRIM4-201ENST00000349062 MTCP1P56278 107 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ACTBP60709 375 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ACTG1P63261 375 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 IGFBP7Q16270 282 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 TUSC5Q8IXB3 177 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 OR2V1Q8NHB1 315 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 RAB3CQ96E17 227 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 MRI1Q9BV20 369 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 FLVCR1Q9Y5Y0 555 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 IGLV3-32A0A0A0MS00 114 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 A0A1B0GW55 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 B4E171 279 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 EEF1E1-BLOC1S5C9J1V9 151 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 RAB27BO00194 218 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4L2P0CJ85 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4L3P0CJ86 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4L4P0CJ87 422 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4L5P0CJ88 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4L6P0CJ89 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4L7P0CJ90 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 CBR1P16152 277 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 PVALBP20472 110 aaPredicted RBP12.18□□□□□ -0.46
TRIM4-201ENST00000349062 SRD5A2P31213 254 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 TSPAN7P41732 249 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 KISS1Q15726 138 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ELFN2Q5R3F8 820 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 OVCH2Q7RTZ1 564 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 OR10Z1Q8NGY1 313 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 LYZL4Q96KX0 146 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
TRIM4-201ENST00000349062 DUX4Q9UBX2 424 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF175Q9Y473 711 aa12.18□□□□□ -0.46
TRIM4-201ENST00000349062 IGKV1-9A0A0C4DH69 117 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 DNASE2O00115 360 aaPredicted RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 HLA-AP01891 365 aaKnown RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 TAS2R19P59542 299 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 RAC3P60763 192 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 TAF9Q16594 264 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 TSPO2Q5TGU0 170 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 DEGS2Q6QHC5 323 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 SPICQ8N5J4 248 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 PNLDC1Q8NA58 520 aaKnown RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 PNPLA2Q96AD5 504 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 TREM1Q9NP99 234 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 RAB22AQ9UL26 194 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 KCNK7Q9Y2U2 307 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 DIDO1Q9BTC0 2240 aaKnown RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 A0A087WZY1 265 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 WIPF3A6NGB9 483 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 OR2AT4A6NND4 320 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 MTRF1O75570 445 aaKnown RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 ARG2P78540 354 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 H3F3AP84243 136 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 UBE2V2Q15819 145 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 SHEQ5VZ18 495 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 MCEMP1Q8IX19 187 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 THRSPQ92748 146 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
TRIM4-201ENST00000349062 KIAA2026Q5HYC2 2103 aa12.17□□□□□ -0.46
TRIM4-201ENST00000349062 GJE1A6NN92 205 aa12.16□□□□□ -0.46
TRIM4-201ENST00000349062 HSPB2A8KAH6 182 aa12.16□□□□□ -0.46
TRIM4-201ENST00000349062 ZNF705EA8MWA4 302 aaPredicted RBP12.16□□□□□ -0.46
TRIM4-201ENST00000349062 HPP00738 406 aa12.16□□□□□ -0.46
TRIM4-201ENST00000349062 GP1BAP07359 652 aa12.16□□□□□ -0.46
TRIM4-201ENST00000349062 CD63P08962 238 aa12.16□□□□□ -0.46
TRIM4-201ENST00000349062 OPRM1P35372 400 aa12.16□□□□□ -0.46
TRIM4-201ENST00000349062 TRIP6Q15654 476 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms