RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 AKR1C3P42330 323 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 HBG1P69891 147 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 HBG2P69892 147 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 C9orf135Q5VTT2 229 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 CTRB2Q6GPI1 263 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 OR51B6Q9H340 312 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 PPP1R2P9O14990 202 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 HPNP05981 417 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 MYF5P13349 255 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 OR3A4PP47883 348 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 TAF9Q16594 264 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 RTN4IP1Q8WWV3 396 aaPredicted RBP13.13□□□□□ -0.31
NUP50-201ENST00000347635 MENTQ9BUN1 341 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 A0A0G2JK05 382 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 FIGNL2A6NMB9 653 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 BGLAPP02818 100 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 DVL1P1P54792 670 aaPredicted RBP13.13□□□□□ -0.31
NUP50-201ENST00000347635 FHL5Q5TD97 284 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 NPAS1Q99742 590 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 VN1R1Q9GZP7 353 aa13.13□□□□□ -0.31
NUP50-201ENST00000347635 OR2J2O76002 312 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 FAHP16930 419 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ASB10Q8WXI3 467 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 DNAJB11Q9UBS4 358 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 SHISA8B8ZZ34 492 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 GSK3AP49840 483 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZP1P60852 638 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 SHBQ15464 509 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 COMMD1Q8N668 190 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZFP62Q8NB50 900 aaPredicted RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 GPX7Q96SL4 187 aaPredicted RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 GPR87Q9BY21 358 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 UQCC1Q9NVA1 299 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 PILRAQ9UKJ1 303 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZNF814B7Z6K7 855 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 XRCC2O43543 280 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 TBX6O95947 436 aaPredicted RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 MYBPHQ13203 477 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 TMEM268Q5VZI3 342 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZNF611Q8N823 705 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 REEP6Q96HR9 211 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 A0A1W2PQD3 144 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZNF273Q14593 569 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 ZNF813Q6ZN06 617 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 DEFB124Q8NES8 71 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 GNPNAT1Q96EK6 184 aaPredicted RBP13.12□□□□□ -0.31
NUP50-201ENST00000347635 C19orf12Q9NSK7 152 aa13.12□□□□□ -0.31
NUP50-201ENST00000347635 FAM221AA4D161 298 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 RNF212BA8MTL3 300 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 ZNF724A8MTY0 619 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 RAB27BO00194 218 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
NUP50-201ENST00000347635 HAGHQ16775 308 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 SHEQ5VZ18 495 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 GP1BAP07359 652 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 ASAH2BP0C7U1 165 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 MIDNQ504T8 468 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 TFAP2EQ6VUC0 442 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 ZNF321PQ8N8H1 164 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 MITD1Q8WV92 249 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
NUP50-201ENST00000347635 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 PMS2P1A4D2B8 440 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 SSSCA1O60232 199 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 KISS1Q15726 138 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 MSMO1Q15800 293 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 FRZBQ92765 325 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 APH1AQ96BI3 265 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 UPK3AO75631 287 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 ADAP1O75689 374 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 NRASP01111 189 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 SLC37A1P57057 533 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 RNF212Q495C1 297 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 NR2C2APQ86WQ0 139 aa13.11□□□□□ -0.31
NUP50-201ENST00000347635 RCL1Q9Y2P8 373 aaKnown RBP13.11□□□□□ -0.31
NUP50-201ENST00000347635 ZFP92A6NM28 416 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 EFEMP2O95967 443 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 GUK1Q16774 197 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 LANCL3Q6ZV70 420 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 ANKRD37Q7Z713 158 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 CBLN2Q8IUK8 224 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 C1orf87Q8N0U7 546 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 BTCP35070 178 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 KCNIP4Q6PIL6 250 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 CLEC18BQ6UXF7 455 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 BATF2Q8N1L9 274 aa13.1□□□□□ -0.31
NUP50-201ENST00000347635 SAT2Q96F10 170 aaPredicted RBP13.1□□□□□ -0.31
NUP50-201ENST00000347635 SEC11CQ9BY50 192 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms