RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CRYGSP22914 178 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 FOXG1P55316 489 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-202ENST00000345734 RAB25P57735 213 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 PSG4Q00888 419 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 HGFACQ04756 655 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 RTP5Q14D33 572 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 RAB35Q15286 201 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SNAI3Q3KNW1 292 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 C1orf100Q5SVJ3 147 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 DOK3Q7L591 496 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 NKAIN3Q8N8D7 197 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-202ENST00000345734 OR5D14Q8NGL3 314 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 OR1F12Q8NHA8 337 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ATG5Q9H1Y0 275 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 PLEKHA1Q9HB21 404 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM138Q9NPI0 162 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 SLC17A5Q9NRA2 495 aa8.05□□□□□ -1.12
ATG4A-202ENST00000345734 ANKRD11Q6UB99 2663 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-202ENST00000345734 GGT3PA6NGU5 568 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 LDLRAD4O15165 306 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 TGM6O95932 706 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 HOXD4P09016 255 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-202ENST00000345734 MNDAP41218 407 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 CCR6P51684 374 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 BPIFB3P59826 476 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 IGFL2Q6UWQ7 119 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 SLC16A14Q7RTX9 510 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 NUFIP2Q7Z417 695 aaKnown RBP8.04□□□□□ -1.12
ATG4A-202ENST00000345734 ADGRE4PQ86SQ3 457 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 OR5AS1Q8N127 324 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 FCAMRQ8WWV6 532 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 SPTSSAQ969W0 71 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 WNT5BQ9H1J7 359 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 BCO1Q9HAY6 547 aa8.04□□□□□ -1.12
ATG4A-202ENST00000345734 CEP295Q9C0D2 2601 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 TRAV18A0A075B6X5 111 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 A0A0U1RQV5 110 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 OR6C6A6NF89 314 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 A8MV72 311 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-202ENST00000345734 GIFP27352 417 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 HTR5AP47898 357 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 ARF1P84077 181 aaKnown RBP8.03□□□□□ -1.12
ATG4A-202ENST00000345734 TNK1Q13470 666 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 TATDN3Q17R31 274 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM255AQ5JRV8 349 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 CHMP1BQ7LBR1 199 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 FOXRED1Q96CU9 486 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-202ENST00000345734 SORCS2Q96PQ0 1159 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 JMJD8Q96S16 334 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 C12orf57Q99622 126 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 MARVELD1Q9BSK0 173 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 LINC00470Q9BZP3 86 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 OR2H1Q9GZK4 316 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 METTL17Q9H7H0 456 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-202ENST00000345734 PCDHB16Q9NRJ7 776 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 PARPBPQ9NWS1 579 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 TIMM10BQ9Y5J6 103 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 ALG5Q9Y673 324 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 APC2O95996 2303 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 GTF3C1Q12789 2109 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 IGKV1-9A0A0C4DH69 117 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF724A8MTY0 619 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 C22orf46C9J442 243 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 INMT-MINDY4F8WBC2 141 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 AMY2AP04746 511 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 MMP7P09237 267 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-202ENST00000345734 AMY2BP19961 511 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF93P35789 620 aaPredicted RBP8.03□□□□□ -1.12
ATG4A-202ENST00000345734 KRTAP27-1Q3LI81 207 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 MOGAT2Q3SYC2 334 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 OR2AE1Q8NHA4 323 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 HRASLSQ9HDD0 168 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF224Q9NZL3 707 aa8.03□□□□□ -1.12
ATG4A-202ENST00000345734 MEIS3P1A6NDR6 274 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 ZNF587BE7ETH6 402 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 DHRS3O75911 302 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 FCER2P06734 321 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 SELLP14151 372 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 GABRA1P14867 456 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 CPN1P15169 458 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 FAHP16930 419 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 QRFPP83859 136 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 PMPCAQ10713 525 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 ECH1Q13011 328 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 SNTB2Q13425 540 aaKnown RBP8.02□□□□□ -1.13
ATG4A-202ENST00000345734 UNC119Q13432 240 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 RNPS1Q15287 305 aaKnown RBP8.02□□□□□ -1.13
ATG4A-202ENST00000345734 PABPC1L2AQ5JQF8 200 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 FAAP20Q6NZ36 180 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 DRAM2Q6UX65 266 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 DNM1P46Q6ZS02 220 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 PGAP1Q75T13 922 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 ZNF627Q7L945 461 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 ANGPTL5Q86XS5 388 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 MCEMP1Q8IX19 187 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 TCTE3Q8IZS6 198 aa8.02□□□□□ -1.13
ATG4A-202ENST00000345734 PAQR4Q8N4S7 273 aaPredicted RBP8.02□□□□□ -1.13
ATG4A-202ENST00000345734 CPEB3Q8NE35 698 aaKnown RBP8.02□□□□□ -1.13
ATG4A-202ENST00000345734 OR5T2Q8NGG2 359 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms