RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CDC42EP2O14613 210 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 OR51H1Q8NH63 302 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 ZNF2Q9BSG1 426 aaPredicted RBP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 LIN7CQ9NUP9 197 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 TINAGQ9UJW2 476 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 CT45A6P0DMU7 189 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 CT45A5P0DMU8 189 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 CT45A7P0DMV0 189 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 RFX2P48378 723 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 GP2P55259 537 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 HIKESHIQ53FT3 197 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 CT45A1Q5HYN5 189 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 SHEQ5VZ18 495 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 LINC00299Q6ZSB3 139 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 MOB1BQ7L9L4 216 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 CT45A3Q8NHU0 189 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 SLC7A6Q92536 515 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 TREM2Q9NZC2 230 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 ANKRD33BA6NCL7 494 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 SLC17A2O00624 439 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 RPS16P62249 146 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 CREB3L2Q70SY1 520 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 OR2W3Q7Z3T1 314 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 LRRC29Q8WV35 223 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 ADGRL4Q9HBW9 690 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 SCN2AQ99250 2005 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 PRF1P14222 555 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 GK2Q14410 553 aaPredicted RBP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 TATDN3Q17R31 274 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 WNT2BQ93097 391 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 PPIL3Q9H2H8 161 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 PTPN13Q12923 2485 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 TRAV38-1A0A0B4J264 116 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 TMEM200CA6NKL6 621 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 C3orf80F5H4A9 247 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 BLOC1S1P78537 153 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 BRICD5Q6PL45 260 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 FAM58AQ8N1B3 248 aa14.51□□□□□ -0.09
SMARCA4-201ENST00000344626 MEX3AA1L020 520 aaKnown RBP14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 I3L521 148 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 OR8U8P0C7N1 319 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 ADPRHL1Q8NDY3 354 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 MSRB2Q9Y3D2 182 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 TMEM235A6NFC5 223 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 TCRBP04435 133 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 ADH4P08319 380 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 ELK1P19419 428 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 MESTQ5EB52 335 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 ADAM5Q6NVV9 412 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 OR5B12Q96R08 314 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 TMEM38BQ9NVV0 291 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 LAMP3Q9UQV4 416 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 MDH2P40926 338 aaKnown RBP14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 CTSSP25774 331 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 CFHR1Q03591 330 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 SCGB2A2Q13296 93 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 PPP1R3CQ9UQK1 317 aa14.5□□□□□ -0.09
SMARCA4-201ENST00000344626 GPANK1O95872 356 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 IGKV1D-16P01601 117 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 GNB3P16520 340 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 ALOX5APP20292 161 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 ZFP36L1Q07352 338 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 ZP4Q12836 540 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 ATPAF1Q5TC12 328 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 CLEC2AQ6UVW9 174 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 OR2H1Q9GZK4 316 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 GAL3ST2Q9H3Q3 398 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 PRSS12P56730 875 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 GNB1P62873 340 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 TLE1Q04724 770 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 SAP30LQ9HAJ7 183 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 RPA2P15927 270 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 AADACP22760 399 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 IGLV3-21P80748 117 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 KISS1Q15726 138 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 OR52W1Q6IF63 320 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 C10orf35Q96D05 121 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 CNTNAP3BQ96NU0 1288 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 TMEM246Q9BRR3 403 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 SMIM3Q9BZL3 60 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 NME2P1O60361 137 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 NME2P22392 152 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 GALP22466 123 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 GSK3AP49840 483 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 SSBP1Q04837 148 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 GGTLC2Q14390 218 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 IAH1Q2TAA2 248 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 PRSS45Q7RTY3 260 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 ZNF546Q86UE3 836 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 TAAR6Q96RI8 345 aa14.49□□□□□ -0.09
SMARCA4-201ENST00000344626 ZNF626Q68DY1 528 aa14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 ADIPOR1Q96A54 375 aa14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 CHST6Q9GZX3 395 aa14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 TMA7Q9Y2S6 64 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 TECTAO75443 2155 aa14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 PIKFYVEQ9Y2I7 2098 aa14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.48□□□□□ -0.098e-7■■■■□ 21.9
SMARCA4-201ENST00000344626 hADV38S2A0JD32 116 aa14.48□□□□□ -0.09
SMARCA4-201ENST00000344626 ANGPTL7O43827 346 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms