RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 NFATC4Q14934 902 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 MPZL3Q6UWV2 235 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 LAX1Q8IWV1 398 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 OR2C3Q8N628 320 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 CLEC1AQ8NC01 280 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 C17orf47Q8NEP4 570 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 LMO3Q8TAP4 145 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SRD5A3Q9H8P0 318 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 DMRT3Q9NQL9 472 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 IL17CQ9P0M4 197 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 OSGIN2Q9Y236 505 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 TECPR2O15040 1411 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM250H0YL14 139 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 DSCR3O14972 297 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 HSF5Q4G112 596 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 OCIAD2Q56VL3 154 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 C18orf63Q68DL7 685 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 DEFB129Q9H1M3 183 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PISDQ9UG56 409 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PAM16Q9Y3D7 125 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SDK2Q58EX2 2172 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 TRAV38-1A0A0B4J264 116 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 KIR2DL5BA0A0G2JN68 375 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 KIR2DL5BA0A0G2JPC4 375 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 RBFOX2O43251 390 aaKnown RBP eCLIP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 TUSC3Q13454 348 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 C17orf64Q86WR6 236 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 KIR2DL5AQ8N109 375 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 RAB1BQ9H0U4 201 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 WDR76Q9H967 626 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ELOVL3Q9HB03 270 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 HEYLQ9NQ87 328 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 STYXL1Q9Y6J8 313 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 KLF7O75840 302 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 NBPF12Q5TAG4 269 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 FIGLAQ6QHK4 219 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 LYPD6BQ8NI32 183 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ROBO4Q8WZ75 1007 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 HHIPL1Q96JK4 782 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 P2RY12Q9H244 342 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SLIT2O94813 1529 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SCN3AQ9NY46 2000 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 NUP153P49790 1475 aaKnown RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 CDC14CA4D256 554 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 C9J4A7 227 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ENTPD3O75355 529 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 LIMS3P0CW19 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 LIMS4P0CW20 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ARL16Q0P5N6 197 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 AWAT1Q58HT5 328 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 CADM4Q8NFZ8 388 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HHLA2Q9UM44 414 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV1-1A0A0B4J248 108 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE12JA6NER3 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 H0YL77 283 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TNFSF13O75888 250 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE7O76087 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HLA-DRB1P01911 266 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE12FP0CL80 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE12GP0CL81 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE12IP0CL82 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SP2Q02086 613 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GAGE4Q13068 117 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ANKRD55Q3KP44 614 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 PYY3Q5JQD4 70 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SYS1Q8N2H4 156 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM234Q8WY98 164 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SNX22Q96L94 193 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 FLT3LGP49771 235 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 DCAF7P61962 342 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 BCL2L1Q07817 233 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TCTN1Q2MV58 587 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ITPRIPL2Q3MIP1 535 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HFE2Q6ZVN8 426 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 NR2C2APQ86WQ0 139 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 TMED6Q8WW62 240 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SPSB2Q99619 263 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ATF6BQ99941 703 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 RBFOX3A6NFN3 312 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ZFP92A6NM28 416 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 DIRC3C9JPN6 131 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 F8VP50 259 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 REG1BP48304 166 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 CXCR3P49682 368 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 FMODQ06828 376 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 HEPN1Q6WQI6 88 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 H2BFWTQ7Z2G1 175 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 AQP10Q96PS8 301 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 LMF2Q9BU23 707 aaKnown RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 MS4A7Q9GZW8 240 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SOD1P00441 154 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 PSG1P11464 419 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 YBEYP58557 167 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-202ENST00000344113 SCIMPQ6UWF3 145 aa3.4□□□□□ -1.87
SYNE2-202ENST00000344113 GALNT14Q96FL9 552 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms