RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 OR10A7Q8NGE5 316 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 NOL4LQ96MY1 436 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 C3orf85A0A1B0GTC6 90 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 G3V3Q6 166 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 NRASP01111 189 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TMEM241Q24JQ0 296 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 DEFB133Q30KQ1 61 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ETFBKMTQ8IXQ9 262 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 INTS12Q96CB8 462 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CIB3Q96Q77 187 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 MANBALQ9NQG1 85 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PSENENQ9NZ42 101 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 MCTS1Q9ULC4 181 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OSGIN2Q9Y236 505 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TRAPPC1Q9Y5R8 145 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 GPR37O15354 613 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ISG15P05161 165 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR10J1P30954 320 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 RPL7L1Q6DKI1 246 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CATSPERDQ86XM0 798 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 C12orf76Q8N812 135 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ADAD2Q8NCV1 583 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR51F2Q8NH61 342 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF296Q8WUU4 475 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 C22orf15Q8WYQ4 148 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TOE1Q96GM8 510 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TSPAN32Q96QS1 320 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FRMPD3Q5JV73 1810 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 A0A1W2PPQ1 181 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 MRPL33O75394 65 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ADAP1O75689 374 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 VSIG10L2P0DP72 767 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CD38P28907 300 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 RPS27P42677 84 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR4A16Q8NH70 328 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 NUDT16L1Q9BRJ7 211 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TLNRD1Q9H1K6 362 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ICAM5Q9UMF0 924 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TIMM8BQ9Y5J9 83 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CD79AP11912 226 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ACKR3P25106 362 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LIMK1P53667 647 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FUT7Q11130 342 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 MESTQ5EB52 335 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LCN15Q6UWW0 184 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 THNSL2Q86YJ6 484 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OXGR1Q96P68 337 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 GPR173Q9NS66 373 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 M0R143 59 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 DLK1P80370 383 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PSG6Q00889 435 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FAM162BQ5T6X4 162 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 UNQ9370/PRO34162Q6UXP9 181 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR2C3Q8N628 320 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 GPR119Q8TDV5 335 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ARSGQ96EG1 525 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 IL21Q9HBE4 155 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CRLF2Q9HC73 371 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 DHCR7Q9UBM7 475 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 ADAM11O75078 769 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 LY86O95711 162 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TXNDC12O95881 172 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 JMJD7P0C870 316 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 SLC2A1P11166 492 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FUT6P51993 359 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CARD18P57730 90 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 RNF4P78317 190 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 MLF2Q15773 248 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TMEM176BQ3YBM2 270 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 H2BFWTQ7Z2G1 175 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR4N2Q8NGD1 307 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 SOSTQ9BQB4 213 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CTDSP1Q9GZU7 261 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PARD6AQ9NPB6 346 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 HDGFL3Q9Y3E1 203 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PRAMEF25A6NGN4 478 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 OR4C45A6NMZ5 311 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 CDRT15L2A8MXV6 281 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 GAPDHP04406 335 aaKnown RBP4.28□□□□□ -1.72
CSMD3-203ENST00000343508 EXT1Q16394 746 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 FGF14Q92915 247 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 PIGTQ969N2 578 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 RAB33BQ9H082 229 aa4.28□□□□□ -1.72
CSMD3-203ENST00000343508 TCAPO15273 167 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 MUC1P15941 1255 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 IL2RGP31785 369 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SUMO3P55854 103 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 NANOS3P60323 173 aaKnown RBP4.27□□□□□ -1.73
CSMD3-203ENST00000343508 ZP1P60852 638 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SPANXN5Q5MJ07 72 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 VAX1Q5SQQ9 334 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SPACA5Q96QH8 159 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 SOX7Q9BT81 388 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 VN1R1Q9GZP7 353 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 HS3ST1O14792 307 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 OPRM1P35372 400 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 HLA-DRB3P79483 266 aa4.27□□□□□ -1.73
CSMD3-203ENST00000343508 PHYHD1Q5SRE7 291 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms