RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SLC26A10Q8NG04 563 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 OR51E1Q8TCB6 317 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 KCNE4Q8WWG9 221 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 SPRY4Q9C004 299 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 GPN1Q9HCN4 374 aaPredicted RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 GDF2Q9UK05 429 aaPredicted RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 NBEAQ8NFP9 2946 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 SMAD9O15198 467 aaKnown RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 IGF2P01344 180 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 MAPK3P27361 379 aaPredicted RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 RAB5BP61020 215 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 MRPS10P82664 201 aaKnown RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 SLC17A1Q14916 467 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 OR51D1Q8NGF3 324 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 GPER1Q99527 375 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 C1orf198Q9H425 327 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 ASCL3Q9NQ33 180 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 AQP7P3A6NL99 342 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 DBX1A6NMT0 343 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 DLL1O00548 723 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 F12P00748 615 aaPredicted RBP11.49□□□□□ -0.57
COL18A1-201ENST00000342220 CPN1P15169 458 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 GSG1LQ6UXU4 331 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 TMUB2Q71RG4 321 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF679Q8IYX0 411 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 PRSS35Q8N3Z0 413 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 TMEM185AQ8NFB2 350 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 OR4C16Q8NGL9 310 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 OR13C9Q8NGT0 318 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 OR52N5Q8NH56 324 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 FGGYQ96C11 551 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 MEGF10Q96KG7 1140 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 SSX3Q99909 188 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF552Q9H707 407 aaPredicted RBP11.49□□□□□ -0.57
COL18A1-201ENST00000342220 ETV7Q9Y603 341 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 GJE1A6NN92 205 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 RBBP9O75884 186 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 RLN1P04808 185 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 FOXG1P55316 489 aaPredicted RBP11.49□□□□□ -0.57
COL18A1-201ENST00000342220 GMFBP60983 142 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 RIPPLY1Q0D2K3 151 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 EIF4E3Q8N5X7 224 aaKnown RBP11.49□□□□□ -0.57
COL18A1-201ENST00000342220 PGAM5Q96HS1 289 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 KCNK17Q96T54 332 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 GINS4Q9BRT9 223 aa11.49□□□□□ -0.57
COL18A1-201ENST00000342220 ADGRG4Q8IZF6 3080 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 A0A1B0GW55 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 SYT7O43581 403 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4L2P0CJ85 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4L3P0CJ86 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4L4P0CJ87 422 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4L5P0CJ88 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4L6P0CJ89 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4L7P0CJ90 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 GABRA1P14867 456 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 RAP2BP61225 183 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF813Q6ZN06 617 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 SVBPQ8N300 66 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 OR2AE1Q8NHA4 323 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 GPR148Q8TDV2 347 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 MRI1Q9BV20 369 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DUX4Q9UBX2 424 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 KLF13Q9Y2Y9 288 aaPredicted RBP11.48□□□□□ -0.57
COL18A1-201ENST00000342220 RELNP78509 3460 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 NCOA6Q14686 2063 aaPredicted RBP11.48□□□□□ -0.57
COL18A1-201ENST00000342220 A0A1B0GWJ7 208 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 CLN5O75503 358 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DKK1O94907 266 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 OR2A4O95047 310 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 LCATP04180 440 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 IL5P05113 134 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 CD2P06729 351 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF84P51523 738 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 MICBQ29980 383 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 BIVMQ86UB2 503 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 OR51A2Q8NGJ7 313 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 OR2A7Q96R45 310 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 TRIB1Q96RU8 372 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 VRK1Q99986 396 aaPredicted RBP11.48□□□□□ -0.57
COL18A1-201ENST00000342220 OR52A1Q9UKL2 312 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 MCTS1Q9ULC4 181 aaKnown RBP11.48□□□□□ -0.57
COL18A1-201ENST00000342220 TRBV5-7A0A0A0MS05 114 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 XRCC3O43542 346 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 CSRP1P21291 193 aaKnown RBP11.48□□□□□ -0.57
COL18A1-201ENST00000342220 KIR3DL2P43630 455 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 H2BFSP57053 126 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 DHODHQ02127 395 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 FABP9Q0Z7S8 132 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 LURAP1Q96LR2 239 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 STEAP1Q9UHE8 339 aa11.48□□□□□ -0.57
COL18A1-201ENST00000342220 TRGV5A0A0B4J1U4 118 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 LOC107986453A0A1B0GWG9 222 aa11.47□□□□□ -0.57
COL18A1-201ENST00000342220 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms