RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 SNRPGP15A8MWD9 76 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF736B4DX44 427 aaPredicted RBP13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 B8ZZF3 427 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 TOXO94900 526 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 MPIG6BO95866 241 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 TBPP20226 339 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 PTGFRP43088 359 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 VEGFCP49767 419 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 NKX2-5P52952 324 aaPredicted RBP13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 MRPL49Q13405 166 aaKnown RBP13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 FCN2Q15485 313 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 IGFBP7Q16270 282 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 PNLIPRP3Q17RR3 467 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 CDNFQ49AH0 187 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 TMEM255AQ5JRV8 349 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 SFRP5Q5T4F7 317 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 ZBTB37Q5TC79 503 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 NANOS1Q8WY41 292 aaKnown RBP13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 SLC25A21Q9BQT8 299 aaPredicted RBP13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF224Q9NZL3 707 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 SCP2D1Q9UJQ7 156 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 TINAGQ9UJW2 476 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 ITGB1BP2Q9UKP3 347 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 POLEQ07864 2286 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
TUBB4B-201ENST00000340384 DISC1C4P0D8 188 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 CREBL2O60519 120 aaPredicted RBP13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 IGHV3-9P01782 118 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 TLE1Q04724 770 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 MOGAT2Q3SYC2 334 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 GLDNQ6ZMI3 551 aaPredicted RBP13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 P4HA3Q7Z4N8 544 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 TRIB1Q96RU8 372 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 LPAR5Q9H1C0 372 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF222Q9UK12 451 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 PLEKHA6Q9Y2H5 1048 aa13.18□□□□□ -0.3
TUBB4B-201ENST00000340384 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 C5orf63A6NC05 138 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 FAM172BPA6NC97 362 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 MEIS3P1A6NDR6 274 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 TMEM235A6NFC5 223 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 CD74P04233 296 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 CD3DP04234 171 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 SULT1A3P0DMM9 295 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 SULT1A4P0DMN0 295 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 NAT2P11245 290 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 CBX5P45973 191 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 GNG2P59768 71 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 PLP2Q04941 152 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 UBE2V2Q15819 145 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 NSUN5P2Q63ZY6 315 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 LHFPL2Q6ZUX7 228 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 NCCRP1Q6ZVX7 275 aaPredicted RBP13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 FJX1Q86VR8 437 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 C9orf106Q8NAJ2 232 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 OR8S1Q8NH09 359 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 CCDC107Q8WV48 283 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 CAPSLQ8WWF8 208 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 GMPPAQ96IJ6 420 aaPredicted RBP13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 C1QTNF5Q9BXJ0 243 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 RANBP3Q9H6Z4 567 aaPredicted RBP13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 RP1L1Q8IWN7 2480 aaPredicted RBP13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 WDR1O75083 606 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 AGTR1P30556 359 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 GZMKP49863 264 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 FAPQ12884 760 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 FAAP20Q6NZ36 180 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 RNF170Q96K19 258 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 C1orf147Q96MC9 270 aaPredicted RBP13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 PRRT1Q99946 306 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 SLC7A11Q9UPY5 501 aa13.17□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 ZNF816-ZNF321PA0A0X1KG74 233 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 AMY2AP04746 511 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 SERPINA5P05154 406 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 ANOS1P23352 680 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 CPT2P23786 658 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 MPGP29372 298 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 MTCP1P56278 107 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 RPS27AP62979 156 aaKnown RBP13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 MALLQ13021 153 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 GUSBP1Q15486 140 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 OR8B8Q15620 311 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 SLC22A6Q4U2R8 563 aa13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 RNASE10Q5GAN6 216 aaKnown RBP13.16□□□□□ -0.3
TUBB4B-201ENST00000340384 NAXEQ8NCW5 288 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms