RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PKP2Q99959 881 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 THTPAQ9BU02 230 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 TLNRD1Q9H1K6 362 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 PPP1R3EQ9H7J1 279 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 SIRT7Q9NRC8 400 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 ZNF319Q9P2F9 582 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 TRRAPQ9Y4A5 3859 aa8.78□□□□□ -1
CAPN3-202ENST00000337571 TMEM269A0A1B0GVZ9 245 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 A0A1B0GW55 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 A0A1W2PQ09 198 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 ANKRD61A6NGH8 418 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 ACOD1A6NK06 481 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 NPFFO15130 113 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 AKR7A2O43488 359 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L2P0CJ85 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L3P0CJ86 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L4P0CJ87 422 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L5P0CJ88 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L6P0CJ89 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L7P0CJ90 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 ANXA8P13928 327 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 GLRA1P23415 457 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 MIDNQ504T8 468 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 NCR3LG1Q68D85 454 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 STUMQ69YW2 141 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DHRS7BQ6IAN0 325 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4L9Q6RFH8 374 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-202ENST00000337571 METAP1DQ6UB28 335 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-202ENST00000337571 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 THAP5Q7Z6K1 395 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 FGFRL1Q8N441 504 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 UBE2FQ969M7 185 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 ITFG2Q969R8 447 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 SEH1LQ96EE3 360 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 RAB3IPQ96QF0 476 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-202ENST00000337571 CITED1Q99966 193 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DCTN5Q9BTE1 182 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 MROQ9BYG7 248 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 WDR13Q9H1Z4 485 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 C1orf21Q9H246 121 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 DUX4Q9UBX2 424 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 SLC25A10Q9UBX3 287 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-202ENST00000337571 MGAM2Q2M2H8 2515 aa8.77□□□□□ -1.01
CAPN3-202ENST00000337571 ZNF816-ZNF321PA0A0X1KG74 233 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 A0A1W2PRD5 423 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 A0A1W2PRF3 423 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 A0A1W2PRM7 423 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 MEIOCA2RUB1 952 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 AQP12BA6NM10 295 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 OR2AT4A6NND4 320 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 ZNF732B4DXR9 585 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 H0YAE9 185 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-202ENST00000337571 FCN3O75636 299 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 ACAA1P09110 424 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-202ENST00000337571 TGFBR2P37173 567 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 GPM6AP51674 278 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 PSMA6P60900 246 aaKnown RBP8.76□□□□□ -1.01
CAPN3-202ENST00000337571 GNG3P63215 75 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 ELF3P78545 371 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-202ENST00000337571 CDK5Q00535 292 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 RIPPLY1Q0D2K3 151 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 APOFQ13790 326 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 SNAPC1Q16533 368 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 TAF9Q16594 264 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 OCLNQ16625 522 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 CEACAM21Q3KPI0 293 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 PDLIM3Q53GG5 364 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-202ENST00000337571 FAM76BQ5HYJ3 339 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 DEGS2Q6QHC5 323 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 ZNF788Q6ZQV5 615 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 SPATA24Q86W54 205 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 AQP12AQ8IXF9 295 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 ADGRG5Q8IZF4 528 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 OR8B12Q8NGG6 310 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 OR5A2Q8NGI9 324 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 LINC01006Q8NI28 216 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 CANT1Q8WVQ1 401 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 CLPTM1LQ96KA5 538 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 YIPF3Q9GZM5 350 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 FAM234AQ9H0X4 552 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 METTL8Q9H825 291 aaKnown RBP8.76□□□□□ -1.01
CAPN3-202ENST00000337571 TCF7L1Q9HCS4 588 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 TAS2R1Q9NYW7 299 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 NLKQ9UBE8 527 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 LRP12Q9Y561 859 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 TMEM14AQ9Y6G1 99 aa8.76□□□□□ -1.01
CAPN3-202ENST00000337571 A0A0U1RQV5 110 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 A0A1W2PPH5 198 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 OR5B21A6NL26 309 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 RNASEK-C17orf49H0YIS7 233 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 M0R1W7 72 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 GYG2O15488 501 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 ZNF254O75437 659 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 MTRF1O75570 445 aaKnown RBP8.75□□□□□ -1.01
CAPN3-202ENST00000337571 CLPXO76031 633 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 T-ENOLP0DO92 83 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 ATP6V1B1P15313 513 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 ALOX5APP20292 161 aa8.75□□□□□ -1.01
CAPN3-202ENST00000337571 PRKACGP22612 351 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms