RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RPL12P30050 165 aaKnown RBP7.65□□□□□ -1.18
TDP1-201ENST00000335725 SMAGPQ0VAQ4 97 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 CPSF6Q16630 551 aaKnown RBP eCLIP7.65□□□□□ -1.18
TDP1-201ENST00000335725 HIST3H3Q16695 136 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 MPV17LQ2QL34 196 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 ACTL10Q5JWF8 245 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 SLC8B1Q6J4K2 584 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 GTF2H5Q6ZYL4 71 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 CALHM1Q8IU99 346 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 OR8I2Q8N0Y5 310 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 SLC39A11Q8N1S5 342 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 C17orf78Q8N4C9 275 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 OR2Z1Q8NG97 314 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 CLEC4CQ8WTT0 213 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 DVL3Q92997 716 aaPredicted RBP7.65□□□□□ -1.18
TDP1-201ENST00000335725 PLA2G12AQ9BZM1 189 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 GEMIN7Q9H840 131 aaKnown RBP7.65□□□□□ -1.18
TDP1-201ENST00000335725 Q9N2K0 584 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 PATJQ8NI35 1801 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 SMIM35A0A1B0GVV1 85 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 HYPMO75409 117 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 ZNF205O95201 554 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 TSPAN13O95857 204 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 TCN2P20062 427 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 KLK2P20151 261 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 EDNRAP25101 427 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 EFNA5P52803 228 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 PLP1P60201 277 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 NR0B2Q15466 257 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 CST9LP1Q5W188 147 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 CCDC144NLQ6NUI1 221 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 LRRC69Q6ZNQ3 347 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 ZNF440Q8IYI8 595 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 NXPE1Q8N323 547 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 NEIL2Q969S2 332 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 ZNF775Q96BV0 537 aaPredicted RBP7.65□□□□□ -1.18
TDP1-201ENST00000335725 ABHD17AQ96GS6 310 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 HPDLQ96IR7 371 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 RARRES2Q99969 163 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 COA1Q9GZY4 146 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 PLA2G2EQ9NZK7 142 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 FBXL17Q9UF56 701 aa7.65□□□□□ -1.18
TDP1-201ENST00000335725 TRAV18A0A075B6X5 111 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FAM72CH0Y354 149 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FCGR2CP31995 323 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 ARRB1P49407 418 aaPredicted RBP7.65□□□□□ -1.19
TDP1-201ENST00000335725 PIGPP57054 158 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 ZXDBP98169 803 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 PRTGQ2VWP7 1150 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 TMEM177Q53S58 311 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FAM72AQ5TYM5 149 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FAM72DQ6L9T8 149 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 Q6ZVH6 145 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FAM72BQ86X60 149 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 TUSC5Q8IXB3 177 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 IL22RA1Q8N6P7 574 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 TMEM99Q8N816 258 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 APCDD1LQ8NCL9 501 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 ZNF563Q8TA94 476 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 CXorf40BQ96DE9 158 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 STARD4Q96DR4 205 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 ALG14Q96F25 216 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 C2orf50Q96LR7 162 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FER1L6-AS2Q96M78 137 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 TRIB3Q96RU7 358 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 CD180Q99467 661 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 ARHGDIGQ99819 225 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 CST11Q9H112 138 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 LINC00597Q9H2U6 94 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 RPF1Q9H9Y2 349 aaKnown RBP7.65□□□□□ -1.19
TDP1-201ENST00000335725 FLRT3Q9NZU0 649 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 FRRS1LQ9P0K9 344 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 STRCP1A6NGW2 1772 aa7.65□□□□□ -1.19
TDP1-201ENST00000335725 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.64□□□□□ -1.19
TDP1-201ENST00000335725 G3V3Y1 287 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 GNB3P16520 340 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 MDKP21741 143 aaPredicted RBP7.64□□□□□ -1.19
TDP1-201ENST00000335725 OMGP23515 440 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 GPR6P46095 362 aaPredicted RBP7.64□□□□□ -1.19
TDP1-201ENST00000335725 FOXF1Q12946 379 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 GNMTQ14749 295 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 CLEC12AQ5QGZ9 265 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 COX20Q5RI15 118 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 TMEM150AQ86TG1 271 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 C1orf174Q8IYL3 243 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 GJD3Q8N144 294 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 CLDN19Q8N6F1 224 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 UBTD2Q8WUN7 234 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 APOBEC4Q8WW27 367 aaKnown RBP7.64□□□□□ -1.19
TDP1-201ENST00000335725 SUSD6Q92537 303 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 LMLNQ96KR4 655 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 DCBLD2Q96PD2 775 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 PSMG3Q9BT73 122 aaPredicted RBP7.64□□□□□ -1.19
TDP1-201ENST00000335725 IGLC7A0M8Q6 106 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 PGPEP1LA6NFU8 196 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 YDJCA8MPS7 323 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 ZBTB42B2RXF5 422 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 CH25HO95992 272 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 TSPOP30536 169 aa7.64□□□□□ -1.19
TDP1-201ENST00000335725 SOAT1P35610 550 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms