RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 M1APQ8TC57 530 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 HAS2Q92819 552 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 C12orf4Q9NQ89 552 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 SHPKQ9UHJ6 478 aa20.49■□□□□ 0.87
NDEL1-201ENST00000334527 F8VVB4 439 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 F8VWA3 439 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 CCL4P13236 92 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 SLC16A14Q7RTX9 510 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF837Q96EG3 531 aaPredicted RBP20.48■□□□□ 0.87
NDEL1-201ENST00000334527 NARS2Q96I59 477 aaKnown RBP20.48■□□□□ 0.87
NDEL1-201ENST00000334527 FOXD3Q9UJU5 478 aaPredicted RBP20.48■□□□□ 0.87
NDEL1-201ENST00000334527 PCDHB10Q9UN67 800 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 SERPINE3A8MV23 424 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 C9J4A7 227 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 TRIM77I1YAP6 450 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 CDK2AP1O14519 115 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF84P51523 738 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 CHRFAM7AQ494W8 412 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 MAML2Q8IZL2 1156 aaPredicted RBP20.48■□□□□ 0.87
NDEL1-201ENST00000334527 ZIC4Q8N9L1 334 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 OR1S2Q8NGQ3 325 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 FBXO17Q96EF6 278 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 TM2D1Q9BX74 207 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 PIGMQ9H3S5 423 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 ASF1BQ9NVP2 202 aa20.48■□□□□ 0.87
NDEL1-201ENST00000334527 A0A0J9YW62 118 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 MTRF1O75570 445 aaKnown RBP20.47■□□□□ 0.87
NDEL1-201ENST00000334527 TPT1P13693 172 aaKnown RBP20.47■□□□□ 0.87
NDEL1-201ENST00000334527 CPT2P23786 658 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 DEFA5Q01523 94 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 SNAI3Q3KNW1 292 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 CCDC36Q8IYA8 594 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 BHLHE23Q8NDY6 225 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 SPTSSAQ969W0 71 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF775Q96BV0 537 aaPredicted RBP20.47■□□□□ 0.87
NDEL1-201ENST00000334527 LRRC46Q96FV0 321 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 METTL8Q9H825 291 aaKnown RBP20.47■□□□□ 0.87
NDEL1-201ENST00000334527 SH2D2AQ9NP31 389 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 ZNF701Q9NV72 531 aaPredicted RBP20.47■□□□□ 0.87
NDEL1-201ENST00000334527 HPF1Q9NWY4 346 aa20.47■□□□□ 0.87
NDEL1-201ENST00000334527 MASP2O00187 686 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 APOC1P02654 83 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 MC2RQ01718 297 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 MARC2Q969Z3 335 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 NECAB3Q96P71 396 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-201ENST00000334527 SRXN1Q9BYN0 137 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 MYO7BQ6PIF6 2116 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 TPD52L2O43399 206 aaKnown RBP20.46■□□□□ 0.87
NDEL1-201ENST00000334527 Q6ZSR3 168 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 RPS19BP1Q86WX3 136 aaKnown RBP20.46■□□□□ 0.87
NDEL1-201ENST00000334527 AGBL5Q8NDL9 886 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 PIGQQ9BRB3 760 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 OR5AC2Q9NZP5 309 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 PCDHGA1Q9Y5H4 931 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 RTTNQ86VV8 2226 aa20.46■□□□□ 0.87
NDEL1-201ENST00000334527 GABRR1P24046 479 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 RAC1P63000 192 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 C6orf201Q7Z4U5 140 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 BAP18Q8IXM2 172 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 INTS12Q96CB8 462 aaKnown RBP20.45■□□□□ 0.86
NDEL1-201ENST00000334527 OR10C1Q96KK4 312 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 NSG1A0A0A6YYJ2 146 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 ARHGDIBP52566 201 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 PRSS54Q6PEW0 395 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 C20orf196Q8IYI0 205 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 SLC30A7Q8NEW0 376 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 OR52H1Q8NGJ2 320 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 RHBDD1Q8TEB9 315 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 SGK3Q96BR1 496 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 C10orf35Q96D05 121 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 CYTL1Q9NRR1 136 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 GPR173Q9NS66 373 aa20.45■□□□□ 0.86
NDEL1-201ENST00000334527 TNRC6BQ9UPQ9 1833 aaKnown RBP20.45■□□□□ 0.86
NDEL1-201ENST00000334527 MSGN1A6NI15 193 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 RPS2P15880 293 aaKnown RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 SUCLG1P53597 346 aaKnown RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 ARL6IP1Q15041 203 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 OR2Y1Q8NGV0 311 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 EMG1Q92979 244 aaKnown RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 NTNG2Q96CW9 530 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 ZC4H2Q9NQZ6 224 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 MCTS1Q9ULC4 181 aaKnown RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 FGF16O43320 207 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 CBR3O75828 277 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 KNG1P01042 644 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 MRPS34P82930 218 aaKnown RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 NAAAQ02083 359 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 AIMP2Q13155 320 aaKnown RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 NKAPLQ5M9Q1 402 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 ZNF468Q5VIY5 522 aaPredicted RBP20.44■□□□□ 0.86
NDEL1-201ENST00000334527 FAM27BQ5VT28 67 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 FAM219AQ8IW50 185 aa20.44■□□□□ 0.86
NDEL1-201ENST00000334527 KIAA1549Q9HCM3 1950 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 CCDC85CA6NKD9 419 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 TMEM225BP0DP42 221 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 MLF1P58340 268 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 SEMA6DQ8NFY4 1073 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 OR2AE1Q8NHA4 323 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 C2orf50Q96LR7 162 aa20.43■□□□□ 0.86
NDEL1-201ENST00000334527 PLEKHJ1Q9NW61 149 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms