RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 A0A1B0GX30 115 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 MSR1P21757 451 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 OR1D5P58170 312 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 GRB2P62993 217 aaKnown RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 Q7L0L9 218 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 COX14Q96I36 57 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 FAAP24Q9BTP7 215 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 FAM234AQ9H0X4 552 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 DTX4Q9Y2E6 619 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 LOC102725191A0A1B0GVB3 256 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 YKT6O15498 198 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 MDKP21741 143 aaPredicted RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 BTCP35070 178 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 MOGAT2Q3SYC2 334 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 OR4F5Q8NH21 305 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 OR4F4Q96R69 305 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF426Q9BUY5 554 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF275Q9NSD4 429 aaPredicted RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 ARID2Q68CP9 1835 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 TLCD2A6NGC4 264 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 KISS1Q15726 138 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 LILRA6Q6PI73 481 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.54□□□□□ -0.4
EPHB3-201ENST00000330394 COMMD1Q8N668 190 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 ST3GAL6Q9Y274 331 aa12.54□□□□□ -0.4
EPHB3-201ENST00000330394 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 ANKRD30BLA7E2S9 258 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 SOX15O60248 233 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.4
EPHB3-201ENST00000330394 BCKDHBP21953 392 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 H3F3AP84243 136 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 VN1R1Q9GZP7 353 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 LIPGQ9Y5X9 500 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 SLCO1B1Q9Y6L6 691 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 MDFIC2A0A1B0GVS7 189 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 OTOL1A6NHN0 477 aaPredicted RBP12.53□□□□□ -0.4
EPHB3-201ENST00000330394 C4orf51C9J302 202 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 ABHD16AO95870 558 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 EPPINO95925 133 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 FOXF1Q12946 379 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 MICBQ29980 383 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF813Q6ZN06 617 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 CDC20BQ86Y33 519 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 FBXL14Q8N1E6 418 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 OR5AC2Q9NZP5 309 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 SRPK3Q9UPE1 567 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 RRADP55042 308 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 RNF4P78317 190 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 ARHGEF39Q8N4T4 335 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 OR5C1Q8NGR4 320 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF764Q96H86 408 aaPredicted RBP12.53□□□□□ -0.4
EPHB3-201ENST00000330394 PIPOXQ9P0Z9 390 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 KLK13Q9UKR3 277 aa12.53□□□□□ -0.4
EPHB3-201ENST00000330394 A0A0G2JK05 382 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 TNFRSF10CO14798 259 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 OR2A4O95047 310 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 ACKR3P25106 362 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.4
EPHB3-201ENST00000330394 RPL29P47914 159 aaKnown RBP12.52□□□□□ -0.4
EPHB3-201ENST00000330394 SCAND1P57086 179 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 MGAT2Q10469 447 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 RNF151Q2KHN1 245 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 SFTPA2Q8IWL1 248 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 ZNF485Q8NCK3 441 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 OR8U1Q8NH10 309 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 FAM210BQ96KR6 192 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 SNX22Q96L94 193 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 OR2A7Q96R45 310 aa12.52□□□□□ -0.4
EPHB3-201ENST00000330394 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
EPHB3-201ENST00000330394 LRP11Q86VZ4 500 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 IL22RA1Q8N6P7 574 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 KCNE5Q9UJ90 142 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 SCRG1O75711 98 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 THY1P04216 161 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 NCR3LG1Q68D85 454 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 OR13D1Q8NGV5 346 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 ADAM19Q9H013 955 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 PPP1R3CQ9UQK1 317 aa12.52□□□□□ -0.41
EPHB3-201ENST00000330394 A0A1W2PP11 408 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MBP02144 154 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 LIMK1P53667 647 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 POLR2GP62487 172 aaKnown RBP eCLIP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MSMO1Q15800 293 aa12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MRPL24Q96A35 216 aaKnown RBP12.51□□□□□ -0.41
EPHB3-201ENST00000330394 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms