RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SAP25Q8TEE9 199 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 MAFIPQ8WZ33 124 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 AQP10Q96PS8 301 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 PECRQ9BY49 303 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 SLC26A1Q9H2B4 701 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 FOXI3A8MTJ6 420 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 F5H5K5 113 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 IGLV3-1P01715 115 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 FAM157CP0CG43 387 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 NAT2P11245 290 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 SLC6A9P48067 706 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 RAB32Q13637 225 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 STK11Q15831 433 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 GUCA2BQ16661 112 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 PLEKHN1Q494U1 663 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 PRAMEF20Q5VT98 475 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 LCN10Q6JVE6 187 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 C1orf210Q8IVY1 113 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 RHBDD1Q8TEB9 315 aa13.49□□□□□ -0.25
BRCC3-201ENST00000330045 C19orf25Q9UFG5 118 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-201ENST00000330045 A0A1W2PQM1 296 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 F8W036 122 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 GDF9O60383 454 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 HPNP05981 417 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 PET100P0DJ07 73 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 RPS2P15880 293 aaKnown RBP13.48□□□□□ -0.25
BRCC3-201ENST00000330045 SERPINA2P20848 420 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 MSR1P21757 451 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 THBS4P35443 961 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 BLOC1S1P78537 153 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 SRSF3P84103 164 aaKnown RBP13.48□□□□□ -0.25
BRCC3-201ENST00000330045 SCRN3Q0VDG4 424 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 POC1AQ8NBT0 407 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 GJC3Q8NFK1 279 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 EMG1Q92979 244 aaKnown RBP13.48□□□□□ -0.25
BRCC3-201ENST00000330045 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 MMP26Q9NRE1 261 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 FIGNL2A6NMB9 653 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 SERPINE3A8MV23 424 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF705EA8MWA4 302 aaPredicted RBP13.48□□□□□ -0.25
BRCC3-201ENST00000330045 DKK1O94907 266 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 CSTBP04080 98 aaKnown RBP13.48□□□□□ -0.25
BRCC3-201ENST00000330045 NR2C1P13056 603 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 HOXA6P31267 233 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
BRCC3-201ENST00000330045 CHRFAM7AQ494W8 412 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 LDLRAD3Q86YD5 345 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 OR51F2Q8NH61 342 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 S100A13Q99584 98 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 OR2S2Q9NQN1 319 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 GSKIPQ9P0R6 139 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 V9GYS6 101 aa13.48□□□□□ -0.25
BRCC3-201ENST00000330045 A0A0U1RQV5 110 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 DHRS3O75911 302 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 HOXB5P09067 269 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 FCGR2AP12318 317 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 FAHP16930 419 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 CSNK1A1P48729 337 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 IL15RAQ13261 267 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 C10orf91Q5T1B1 145 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 NSUN5P2Q63ZY6 315 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 OR4A4PQ8NGN8 299 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 WNT2BQ93097 391 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 SLC5A7Q9GZV3 580 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 NELFAQ9H3P2 528 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 DNAJB11Q9UBS4 358 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 CHCHD2Q9Y6H1 151 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-201ENST00000330045 MED12Q93074 2177 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 CCDC163A0A0D9SF12 145 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 NDUFA2O43678 99 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 KNG1P01042 644 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 H2AFB1P0C5Y9 115 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 CCL7P80098 99 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 SURF2Q15527 256 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-201ENST00000330045 HAGHLQ6PII5 290 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-201ENST00000330045 IL34Q6ZMJ4 242 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 TMEM200AQ86VY9 491 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 FAM219AQ8IW50 185 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 PP6455Q8WZ26 134 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 ADAT1Q9BUB4 502 aaKnown RBP13.47□□□□□ -0.25
BRCC3-201ENST00000330045 TM2D1Q9BX74 207 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 ELL3Q9HB65 397 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-201ENST00000330045 TREM1Q9NP99 234 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 LPAR3Q9UBY5 353 aa13.47□□□□□ -0.25
BRCC3-201ENST00000330045 CARHSP1Q9Y2V2 147 aaKnown RBP13.47□□□□□ -0.25
BRCC3-201ENST00000330045 OR5H15A6NDH6 313 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 TP53I11O14683 189 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 ONECUT2O95948 504 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 CPT2P23786 658 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 S100A10P60903 97 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 H3F3AP84243 136 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
BRCC3-201ENST00000330045 ARL6IP1Q15041 203 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 MST1LQ2TV78 715 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms