RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OXA1LQ15070 435 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 TRIM16LQ309B1 348 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 STEAP3Q658P3 488 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 ASPHD2Q6ICH7 369 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 Q6ZNX1 250 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 LYPD6Q86Y78 171 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 SEMA6DQ8NFY4 1073 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 OR5L1Q8NGL2 311 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 IGFBPL1Q8WX77 278 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 FAM3DQ96BQ1 224 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 SGK3Q96BR1 496 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 ORAI1Q96D31 301 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 ADAT3Q96EY9 351 aaPredicted RBP14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 FAM71F1Q96KD3 344 aaPredicted RBP14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 COX4I2Q96KJ9 171 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 USB1Q9BQ65 265 aaKnown RBP14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 DIABLOQ9NR28 239 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 TUBG2Q9NRH3 451 aa14.14□□□□□ -0.15
PDLIM1-201ENST00000329399 DBHP09172 617 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 IL7P13232 177 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 ARSBP15848 533 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 DNASE1P24855 282 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 HOXC12P31275 282 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 IFITM3Q01628 133 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 TRIQKQ629K1 86 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 UNQ6126/PRO20091Q6UXV3 157 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 DCDC5Q6ZRR9 648 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 KRT74Q7RTS7 529 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 MYPOPQ86VE0 399 aaPredicted RBP14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 C1orf174Q8IYL3 243 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 C19orf18Q8NEA5 215 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 OR4M1Q8NGD0 313 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 OR5H6Q8NGV6 325 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 FGFBP3Q8TAT2 258 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 PHF21AQ96BD5 680 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 SPSB1Q96BD6 273 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 REEP6Q96HR9 211 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 CHST5Q9GZS9 411 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 RNF115Q9Y4L5 304 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 N6AMT1Q9Y5N5 214 aa14.13□□□□□ -0.15
PDLIM1-201ENST00000329399 M0R1B8 84 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ABCD4O14678 606 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 HS3ST1O14792 307 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 GSTZ1O43708 216 aaPredicted RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ICMTO60725 284 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 BPNT1O95861 308 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 HLA-HP01893 362 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CD3EP07766 207 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 PRKACBP22694 351 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CD40P25942 277 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ASAH1Q13510 395 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 GLYATL3Q5SZD4 288 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 NAA40Q86UY6 237 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 JAGN1Q8N5M9 183 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 FAM169BQ8N8A8 192 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 PNLDC1Q8NA58 520 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 POC5Q8NA72 575 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CPEB3Q8NE35 698 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 DEDD2Q8WXF8 326 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 NINJ1Q92982 152 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 SLC25A28Q96A46 364 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 LYZL4Q96KX0 146 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ESRP2Q9H6T0 727 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 TBCCD1Q9NVR7 557 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 RHBDL2Q9NX52 303 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 MED13LQ71F56 2210 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 SOD3P08294 240 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CELA3BP08861 270 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 PATE4P0C8F1 98 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 OCMP0CE72 109 aaPredicted RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ZNF93P35789 620 aaPredicted RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ALDH3B1P43353 468 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 INPP1P49441 399 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 GSK3AP49840 483 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CNN3Q15417 329 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 OR8B8Q15620 311 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 DEFB113Q30KQ7 82 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 C2orf76Q3KRA6 126 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 ZNF672Q499Z4 452 aaPredicted RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 RAB12Q6IQ22 244 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 SSX8Q7RTT4 187 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 OR2W3Q7Z3T1 314 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 KRTAP1-3Q8IUG1 177 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CMTM4Q8IZR5 234 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CENPSQ8N2Z9 138 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 FTMTQ8N4E7 242 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 SYNPRQ8TBG9 265 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 SLC7A6Q92536 515 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 MBD6Q96DN6 1003 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 POM121L2Q96KW2 1035 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 NUDT16L1Q9BRJ7 211 aaKnown RBP14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 CXXC4Q9H2H0 198 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 NOX3Q9HBY0 568 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 NGBQ9NPG2 151 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 RAB22AQ9UL26 194 aa14.12□□□□□ -0.15
PDLIM1-201ENST00000329399 IGHV1-18A0A0C4DH31 117 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 METTL21EPA6NDL7 271 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 E7EQL1 145 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 XRCC3O43542 346 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 CSF3P09919 207 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms