RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 C11orf88Q6PI97 169 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 TMPRSS7Q7RTY8 843 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 VASH2Q86V25 355 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 FTMTQ8N4E7 242 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 MDS2Q8NDY4 140 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR2AK2Q8NG84 335 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR8H1Q8NGG4 311 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 OR56B1Q8NGI3 324 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 LILRB4Q8NHJ6 448 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 TMEM45BQ96B21 275 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PRRT1Q99946 306 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 NUDT16L1Q9BRJ7 211 aaKnown RBP6.6□□□□□ -1.35
IFT88-201ENST00000319980 ALX4Q9H161 411 aaPredicted RBP6.6□□□□□ -1.35
IFT88-201ENST00000319980 DEFB127Q9H1M4 99 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 PARPBPQ9NWS1 579 aa6.6□□□□□ -1.35
IFT88-201ENST00000319980 GOSR2O14653 212 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 NKX2-8O15522 239 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 ZNHIT1O43257 154 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 PMP2P02689 132 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 IFNA6P05013 189 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 TMEM225BP0DP42 221 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 NAT2P11245 290 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 HTR2BP41595 481 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 FOXG1P55316 489 aaPredicted RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 RPS27AP62979 156 aaKnown RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 ARF1P84077 181 aaKnown RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 ZNF92Q03936 586 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 SRSF6Q13247 344 aaKnown RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 ARFRP1Q13795 201 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 FAM189A2Q15884 450 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 C6orf183Q5T699 404 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 GLRX5Q86SX6 157 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 NAXEQ8NCW5 288 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 CCDC107Q8WV48 283 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 C10orf35Q96D05 121 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 LDAHQ9H6V9 325 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 GHRLQ9UBU3 117 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 PLEKHA6Q9Y2H5 1048 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 PIEZO1Q92508 2521 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 ANGPTL7O43827 346 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 RAD51DO75771 328 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 OR2A4O95047 310 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 ALX3O95076 343 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 GIPP09681 153 aaPredicted RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 ZNF24P17028 368 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 BLVRBP30043 206 aaPredicted RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 RAP2BP61225 183 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 TM4SF20Q53R12 229 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 Q6ZSR3 168 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 ZFP62Q8NB50 900 aaPredicted RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 OR4K15Q8NH41 348 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 EAF1Q96JC9 268 aaPredicted RBP6.59□□□□□ -1.35
IFT88-201ENST00000319980 OR2A7Q96R45 310 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 CSAG2Q9Y5P2 127 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 LIPGQ9Y5X9 500 aa6.59□□□□□ -1.35
IFT88-201ENST00000319980 RIF1Q5UIP0 2472 aaKnown RBP6.59□□□□□ -1.36
IFT88-201ENST00000319980 ZNF587BE7ETH6 402 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 SLC22A5O76082 557 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 HLA-HP01893 362 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 CCL2P13500 99 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 S100A1P23297 94 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ALDH3B1P43353 468 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ID4P47928 161 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZNF766Q5HY98 468 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 RNFT1Q5M7Z0 435 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 DCAF12L2Q5VW00 463 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 MCEMP1Q8IX19 187 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FAM89BQ8N5H3 189 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 CCDC54Q8NEL0 328 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 APH1AQ96BI3 265 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 GPR137Q96N19 417 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ST6GALNAC5Q9BVH7 336 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZNF552Q9H707 407 aaPredicted RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 OPN4Q9UHM6 478 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 VSIG4Q9Y279 399 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FRYQ5TBA9 3013 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 OR2AT4A6NND4 320 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 DHRS7CA6NNS2 312 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 MFNGO00587 321 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 SPRY1O43609 319 aaPredicted RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 HLA-AP01891 365 aaKnown RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZNF35P13682 527 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 GABRR1P24046 479 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 CCL11P51671 97 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 DHRS2Q13268 280 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 MICBQ29980 383 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FAM169BQ8N8A8 192 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 STEAP2Q8NFT2 490 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 FBXW5Q969U6 566 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 MRGPRFQ96AM1 343 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 SPSB1Q96BD6 273 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 SLC2A8Q9NY64 477 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 ZNF230Q9UIE0 474 aaPredicted RBP6.58□□□□□ -1.36
IFT88-201ENST00000319980 IGKV1-27A0A075B6S5 117 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 CDRT15L2A8MXV6 281 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 TM4SF5O14894 197 aa6.58□□□□□ -1.36
IFT88-201ENST00000319980 NOS1APO75052 506 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms