RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 DAZLQ92904 295 aaKnown RBP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 ELSPBP1Q96BH3 223 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 C1orf198Q9H425 327 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 DOCK11Q5JSL3 2073 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 ZDBF2Q9HCK1 2354 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 IGHV5-51A0A0C4DH38 117 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PHOX2AO14813 284 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 HMGB3O15347 200 aaKnown RBP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 CYB5BO43169 146 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PRAMEF20Q5VT98 475 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PRSS54Q6PEW0 395 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 LRRC75AQ8NAA5 344 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PGAM5Q96HS1 289 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 OR5B2Q96R09 309 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 HSF4Q9ULV5 492 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 POLEQ07864 2286 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 RALGAPA1Q6GYQ0 2036 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 IGHV3-64DA0A0J9YX35 117 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 CXorf51AA0A1B0GTR3 108 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 H0YL77 283 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 SCAF4O95104 1147 aaKnown RBP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 TTRP02766 147 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 CD63P08962 238 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PNLIPP16233 465 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 GUCA1AP43080 201 aaPredicted RBP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 ZNF121P58317 390 aaPredicted RBP12.57□□□□□ -0.4
PABPC1-201ENST00000318607 UBE2KP61086 200 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 SLC30A7Q8NEW0 376 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 OR11L1Q8NGX0 322 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 C2orf50Q96LR7 162 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 GGACTQ9BVM4 153 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 COPS7AQ9UBW8 275 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 MEMO1Q9Y316 297 aa12.57□□□□□ -0.4
PABPC1-201ENST00000318607 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 CSTBP04080 98 aaKnown RBP12.56□□□□□ -0.4
PABPC1-201ENST00000318607 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 MECP2P51608 486 aaKnown RBP12.56□□□□□ -0.4
PABPC1-201ENST00000318607 MLF1P58340 268 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 MRGPRX1Q96LB2 322 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 FAAP24Q9BTP7 215 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 VN1R1Q9GZP7 353 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SLCO5A1Q9H2Y9 848 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 TXNIPQ9H3M7 391 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 IL23AQ9NPF7 189 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 ZNF319Q9P2F9 582 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 TINAGQ9UJW2 476 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SFT2D2O95562 160 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 PATE4P0C8F1 98 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 EIF2S3P41091 472 aaKnown RBP12.56□□□□□ -0.4
PABPC1-201ENST00000318607 RSU1Q15404 277 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 OR2AE1Q8NHA4 323 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SDHAF3Q9NRP4 125 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SLC7A11Q9UPY5 501 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 HEATR1Q9H583 2144 aaKnown RBP12.56□□□□□ -0.4
PABPC1-201ENST00000318607 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 PHYHO14832 338 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SNAPC5O75971 98 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 CD79AP11912 226 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 CSRP1P21291 193 aaKnown RBP12.56□□□□□ -0.4
PABPC1-201ENST00000318607 CRABP1P29762 137 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 TMEM50BP56557 158 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 PIGPP57054 158 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 RUNX1Q01196 453 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 GGNBP1Q5YKI7 109 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 UBALD1Q8TB05 177 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 PTPMT1Q8WUK0 201 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-201ENST00000318607 LRFN5Q96NI6 719 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 SMOC1Q9H4F8 434 aa12.56□□□□□ -0.4
PABPC1-201ENST00000318607 RHPN2P1A8MT19 583 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 MT-ND4LP03901 98 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 DBHP09172 617 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 MMP9P14780 707 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 CCNOP22674 350 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 DVL1P1P54792 670 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 SUPT4H1P63272 117 aaKnown RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 CCL20P78556 96 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 FBXW12Q6X9E4 464 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 AQP3Q92482 292 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 C8orf44Q96CB5 159 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 MFRPQ9BY79 579 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 LPAR5Q9H1C0 372 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 IGLV1-36A0A0B4J1U3 117 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 FAM24AA6NFZ4 105 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 ZFP92A6NM28 416 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 PLA2G5P39877 138 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 RPS16P62249 146 aaKnown RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 RAP1AP62834 184 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 RBM24Q9BX46 236 aaKnown RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 G6PC2Q9NQR9 355 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 CACFD1Q9UGQ2 172 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 B3GALT5Q9Y2C3 310 aa12.55□□□□□ -0.4
PABPC1-201ENST00000318607 YBX2Q9Y2T7 364 aaKnown RBP12.55□□□□□ -0.4
PABPC1-201ENST00000318607 C5orf52A6NGY3 159 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms