RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TERTO14746 1132 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 BLVRBP30043 206 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM50BP56557 158 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TAF9Q16594 264 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 AADACL3Q5VUY0 350 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM104Q8NE00 496 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 OR51T1Q8NGJ9 327 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ELSPBP1Q96BH3 223 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NAA60Q9H7X0 242 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 RHBDD3Q9Y3P4 386 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NINQ8N4C6 2090 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TRIP12Q14669 1992 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 NRG2O14511 850 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 YIF1AO95070 293 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GCGP01275 180 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 CRYABP02511 175 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 KLK3P07288 261 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GRB2P62993 217 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 DEFB103AP81534 67 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 CHRDL2Q6WN34 429 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PRSS41Q7RTY9 318 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 MRPL52Q86TS9 123 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF429Q86V71 674 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 COMMD2Q86X83 199 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 PPP1R14AQ96A00 147 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 VDAC3Q9Y277 283 aa4.23□□□□□ -1.73
PTPN13-201ENST00000316707 GOLGA4Q13439 2230 aaKnown RBP4.23□□□□□ -1.73
PTPN13-201ENST00000316707 TRBV23OR9-2A0A075B6M9 112 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 TRBV23-1A0A0A0MS06 115 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BKO60814 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BJP06899 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 OR13C7P0DN81 318 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HNRNPA2B1P22626 353 aaKnown RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BOP23527 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BBP33778 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 UCP3P55916 312 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BDP58876 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BCP62807 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST2H2BEQ16778 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 OR5L2Q8NGL0 311 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 OR2G3Q8NGZ4 309 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BHQ93079 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 C14orf144Q96I85 54 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 C1orf147Q96MC9 270 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 GNRHR2Q96P88 292 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 LRRC3BQ96PB8 259 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 KCNK17Q96T54 332 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BNQ99877 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST1H2BMQ99879 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 IER2Q9BTL4 223 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 ANXA10Q9UJ72 324 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 NSG1A0A0A6YYJ2 146 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 OR2W5A6NFC9 320 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 SCAF4O95104 1147 aaKnown RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 PI3P19957 117 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 CCL1P22362 96 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 FKBP2P26885 142 aaKnown RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 AKT2P31751 481 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 GLIPR1P48060 266 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 BLKP51451 505 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 RND2P52198 227 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 VAMP2P63027 116 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 TMPPEQ6ZT21 453 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HIST3H2BBQ8N257 126 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 ARHGAP5-AS1Q96IT6 56 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 PACRGQ96M98 296 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF2Q9BSG1 426 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 C20orf24Q9BUV8 137 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 SCRT1Q9BWW7 348 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 CHRNA10Q9GZZ6 450 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF701Q9NV72 531 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 VAX2Q9UIW0 290 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 PGA3P0DJD8 388 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 GLRA1P23415 457 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 CTNNB1P35222 781 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 PTGER4P35408 488 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 USF2Q15853 346 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM176BQ3YBM2 270 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 LIAT1Q6ZQX7 453 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 OR2C3Q8N628 320 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 PTGES2Q9H7Z7 377 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 HSF4Q9ULV5 492 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 LINC01553A4QN01 128 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 NTSR1P30989 418 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 MESP2Q0VG99 397 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 JOSD1Q15040 202 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 GAB4Q2WGN9 574 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 PLAC9Q5JTB6 97 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 COA6Q5JTJ3 125 aaKnown RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 FAM78AQ5JUQ0 283 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 THEM4Q5T1C6 240 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 CLEC9AQ6UXN8 241 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 SLC16A14Q7RTX9 510 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 TGIF2LYQ8IUE0 185 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 C11orf40Q8WZ69 217 aa4.22□□□□□ -1.73
PTPN13-201ENST00000316707 MRPL24Q96A35 216 aaKnown RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 ADAT3Q96EY9 351 aaPredicted RBP4.22□□□□□ -1.73
PTPN13-201ENST00000316707 GAL3ST4Q96RP7 486 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms