RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IGHG3P01860 377 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 TMEM225BP0DP42 221 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 RAB1AP62820 205 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 RTP5Q14D33 572 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 OR8B8Q15620 311 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 SPSB4Q96A44 273 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 DLL4Q9NR61 685 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 SCP2D1Q9UJQ7 156 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 NPTNQ9Y639 398 aa15.93■□□□□ 0.14
CCDC43-201ENST00000315286 TRAV17A0A0B4J275 112 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 C5orf49A4QMS7 147 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 OR14I1A6ND48 311 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 ZNF891A8MT65 544 aaPredicted RBP15.92■□□□□ 0.14
CCDC43-201ENST00000315286 FOXI3A8MTJ6 420 aaPredicted RBP15.92■□□□□ 0.14
CCDC43-201ENST00000315286 MFNGO00587 321 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 PRKACBP22694 351 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 MEF2DQ14814 521 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 CNN3Q15417 329 aaKnown RBP15.92■□□□□ 0.14
CCDC43-201ENST00000315286 SCGB2B2Q4G0G5 96 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 RNASE10Q5GAN6 216 aaKnown RBP15.92■□□□□ 0.14
CCDC43-201ENST00000315286 OR13C8Q8NGS7 320 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 SLC25A21Q9BQT8 299 aaPredicted RBP15.92■□□□□ 0.14
CCDC43-201ENST00000315286 ZNF175Q9Y473 711 aa15.92■□□□□ 0.14
CCDC43-201ENST00000315286 AKR7A2O43488 359 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 FBXW9Q5XUX1 488 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 NLRC3Q7RTR2 1065 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 ASCC1Q8N9N2 400 aaKnown RBP15.91■□□□□ 0.14
CCDC43-201ENST00000315286 STEAP2Q8NFT2 490 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 OR11H4Q8NGC9 324 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 TM2D1Q9BX74 207 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 POFUT1Q9H488 388 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 RANBP3Q9H6Z4 567 aaPredicted RBP15.91■□□□□ 0.14
CCDC43-201ENST00000315286 CA10Q9NS85 328 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 MGAT4CQ9UBM8 478 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 KCNMB2Q9Y691 235 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 DISC1C4P0D8 188 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 SPRY1O43609 319 aaPredicted RBP15.91■□□□□ 0.14
CCDC43-201ENST00000315286 ANGPTL7O43827 346 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 IL18BPO95998 194 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 COX5BP10606 129 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 BLVRBP30043 206 aaPredicted RBP15.91■□□□□ 0.14
CCDC43-201ENST00000315286 HRH1P35367 487 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 ARR3P36575 388 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 RBP2P50120 134 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 SNRPD2P62316 118 aaKnown RBP15.91■□□□□ 0.14
CCDC43-201ENST00000315286 CXADRP78310 365 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 PNLIPRP3Q17RR3 467 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 SPICQ8N5J4 248 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 BORCS8Q96FH0 119 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 GP6Q9HCN6 339 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 AKAP13Q12802 2813 aa15.91■□□□□ 0.14
CCDC43-201ENST00000315286 TMEM82A0PJX8 343 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 EFSO43281 561 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 PLATP00750 562 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 MPGP29372 298 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 HIKESHIQ53FT3 197 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 P4HA3Q7Z4N8 544 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 MUC20Q8N307 709 aaPredicted RBP15.9■□□□□ 0.14
CCDC43-201ENST00000315286 PIGCQ92535 297 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 SNAPC3Q92966 411 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 ALX4Q9H161 411 aaPredicted RBP15.9■□□□□ 0.14
CCDC43-201ENST00000315286 SLC2A8Q9NY64 477 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 MGAT4AQ9UM21 535 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 HSPB11Q9Y547 144 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
CCDC43-201ENST00000315286 CEACAM4O75871 244 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 LHFPL2Q6ZUX7 228 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 MOB3CQ70IA8 216 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 C9orf62Q8N4C0 152 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 OR1K1Q8NGR3 316 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 CHIAQ9BZP6 476 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 ANAPC10Q9UM13 185 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 PLEKHA6Q9Y2H5 1048 aa15.9■□□□□ 0.14
CCDC43-201ENST00000315286 ZNF816-ZNF321PA0A0X1KG74 233 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 UBE2QL1A1L167 161 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 PMP2P02689 132 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 OR3A2P47893 321 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 UBE2MP61081 183 aaKnown RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 ARFRP1Q13795 201 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 GK2Q14410 553 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 C4orf46Q504U0 113 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 ATPAF1Q5TC12 328 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 TMEM53Q6P2H8 277 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 TMED4Q7Z7H5 227 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 ZNF431Q8TF32 576 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 BCL2L2Q92843 193 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 MRGPRFQ96AM1 343 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 GMPPAQ96IJ6 420 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 POM121L2Q96KW2 1035 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 PRRT1Q99946 306 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 REPIN1Q9BWE0 567 aaKnown RBP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 PECRQ9BY49 303 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 METTL9Q9H1A3 318 aa15.89■□□□□ 0.13
CCDC43-201ENST00000315286 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC43-201ENST00000315286 HTR3BO95264 441 aa15.88■□□□□ 0.13
CCDC43-201ENST00000315286 NAT1P18440 290 aa15.88■□□□□ 0.13
CCDC43-201ENST00000315286 CPT2P23786 658 aa15.88■□□□□ 0.13
CCDC43-201ENST00000315286 MPZP25189 248 aa15.88■□□□□ 0.13
CCDC43-201ENST00000315286 PLCXD3Q63HM9 321 aa15.88■□□□□ 0.13
CCDC43-201ENST00000315286 OR2T35Q8NGX2 323 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms