RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 DNASE2O00115 360 aaPredicted RBP10.87□□□□□ -0.67
RNF4-201ENST00000314289 SOCS1O15524 211 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 SGCEO43556 437 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 AMY2AP04746 511 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 AKAIN1P0CW23 69 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 CASRP41180 1078 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 RPL35P42766 123 aaKnown RBP10.87□□□□□ -0.67
RNF4-201ENST00000314289 FJX1Q86VR8 437 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 OR14K1Q8NGZ2 314 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 CDC6Q99741 560 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 FAM86C1Q9NVL1 165 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 METTL21EPA6NDL7 271 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 C21orf140B9A014 251 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 CRTAPO75718 401 aaPredicted RBP10.86□□□□□ -0.67
RNF4-201ENST00000314289 RAB3DO95716 219 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 UBE2V2Q15819 145 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 LRRC37A5PQ49AS3 106 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 BEX5Q5H9J7 111 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 TRAPPC6BQ86SZ2 158 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 SUMF1Q8NBK3 374 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 CLRN3Q8NCR9 226 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 PXT1Q8NFP0 134 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 MICU1Q9BPX6 476 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 FAM173AQ9BQD7 235 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 EXO5Q9H790 373 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 MOB1AQ9H8S9 216 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 DMXL2Q8TDJ6 3036 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 A0A0A6YYD4 124 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 CCL2P13500 99 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 CCNOP22674 350 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 FAUP35544 74 aaKnown RBP10.86□□□□□ -0.67
RNF4-201ENST00000314289 TSPO2Q5TGU0 170 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 DOK3Q7L591 496 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 SLC36A1Q7Z2H8 476 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 TUSC5Q8IXB3 177 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 BATF2Q8N1L9 274 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 TMEM251Q8N6I4 163 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 FOXB1Q99853 325 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 DEFB127Q9H1M4 99 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 ATMQ13315 3056 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 NDUFA2O43678 99 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 CYB5AP00167 134 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 LCATP04180 440 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 NR2C1P13056 603 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 QRFPP83859 136 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 ATXN7L3Q14CW9 347 aaPredicted RBP10.86□□□□□ -0.67
RNF4-201ENST00000314289 PRR14LQ5THK1 2151 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 FAM27BQ5VT28 67 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 FOXRED1Q96CU9 486 aaPredicted RBP10.86□□□□□ -0.67
RNF4-201ENST00000314289 SLC17A5Q9NRA2 495 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 GPR173Q9NS66 373 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 TMEM38BQ9NVV0 291 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 ZNF230Q9UIE0 474 aaPredicted RBP10.86□□□□□ -0.67
RNF4-201ENST00000314289 RAB22AQ9UL26 194 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 LIPGQ9Y5X9 500 aa10.86□□□□□ -0.67
RNF4-201ENST00000314289 SPINK2P20155 84 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 ACKR3P25106 362 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 HTR5AP47898 357 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 MRPS34P82930 218 aaKnown RBP10.85□□□□□ -0.67
RNF4-201ENST00000314289 ZNF529Q6P280 563 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.85□□□□□ -0.67
RNF4-201ENST00000314289 SKA3Q8IX90 412 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 SGK3Q96BR1 496 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 SF3B5Q9BWJ5 86 aaKnown RBP10.85□□□□□ -0.67
RNF4-201ENST00000314289 NOSIPQ9Y314 301 aaKnown RBP10.85□□□□□ -0.67
RNF4-201ENST00000314289 ZNF736B4DX44 427 aaPredicted RBP10.85□□□□□ -0.67
RNF4-201ENST00000314289 NKX2-8O15522 239 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 CD37P11049 281 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 FCGR2AP12318 317 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 SERPINA2P20848 420 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 LHX2P50458 406 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 PSG4Q00888 419 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 EIF3IQ13347 325 aaKnown RBP10.85□□□□□ -0.67
RNF4-201ENST00000314289 KISS1Q15726 138 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 ZNF260Q3ZCT1 412 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 CLVS2Q5SYC1 327 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 SHEQ5VZ18 495 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 TMEM88Q6PEY1 159 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 RHOUQ7L0Q8 258 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 SLC6A7Q99884 636 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 CUL9Q8IWT3 2517 aa10.85□□□□□ -0.67
RNF4-201ENST00000314289 CALCRP30988 508 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 AKR1C2P52895 323 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ACTBP60709 375 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ACTG1P63261 375 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 PMP22Q01453 160 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 AKR1C1Q04828 323 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 AIMP2Q13155 320 aaKnown RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 PLAC9Q5JTB6 97 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ABLIM2Q6H8Q1 611 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ZNF546Q86UE3 836 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ZNF584Q8IVC4 421 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 BPIFB2Q8N4F0 458 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 BPIFCQ8NFQ6 507 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 CPNE4Q96A23 557 aaPredicted RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 C1orf147Q96MC9 270 aaPredicted RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 PRRG4Q9BZD6 226 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms