RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 OR52W1Q6IF63 320 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 OR10K2Q6IF99 312 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 FAM220AQ7Z4H9 259 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 TMEM251Q8N6I4 163 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 OR2M3Q8NG83 312 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 OR14L1PQ8NHC6 308 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF417Q8TAU3 575 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 MITD1Q8WV92 249 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
VANGL1-201ENST00000310260 HRH4Q9H3N8 390 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 PTGES2Q9H7Z7 377 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 NPIPA1Q9UND3 350 aa11.18□□□□□ -0.62
VANGL1-201ENST00000310260 A0A1B0GTH9 108 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 A0A1B0GWA3 101 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 A6NLC8 198 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 C9JQL5 133 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 CBR3O75828 277 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 CRHP06850 196 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 GUSBP08236 651 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 PMELP40967 661 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
VANGL1-201ENST00000310260 SKP2Q13309 424 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 HYAL4Q2M3T9 481 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 SCGB2B2Q4G0G5 96 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 TMEM244Q5VVB8 128 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 DCUN1D4Q92564 292 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF524Q96C55 264 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 SMIM8Q96KF7 97 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 SLC6A7Q99884 636 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 CST11Q9H112 138 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 SLC17A5Q9NRA2 495 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 B4GALT7Q9UBV7 327 aa11.17□□□□□ -0.62
VANGL1-201ENST00000310260 LOC100289279A0A1B0GTE1 492 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 OR4C45A6NMZ5 311 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 RNASEK-C17orf49H0YIS7 233 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 FREM3P0C091 2139 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 NQO2P16083 231 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 WIPI1Q5MNZ9 446 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 SLC25A42Q86VD7 318 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 BPIFB2Q8N4F0 458 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ZSCAN4Q8NAM6 433 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 RNF138Q8WVD3 245 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 FAM3DQ96BQ1 224 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 RASD2Q96D21 266 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 DNAJA3Q96EY1 480 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 BBC3Q96PG8 261 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ASH2LQ9UBL3 628 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 CACFD1Q9UGQ2 172 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF346Q9UL40 294 aaKnown RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF407Q9C0G0 2248 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 CFAP46Q8IYW2 2715 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 TMEM72A0PK05 275 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 FAM171A2A8MVW0 826 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 H3BSH0 61 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 DOK2O60496 412 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 GLCEO94923 617 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 WISP1O95388 367 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 CD5P06127 495 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 BTF3P20290 206 aaKnown RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 AQP2P41181 271 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 SLC10A1Q14973 349 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 RAB11BQ15907 218 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 C2orf76Q3KRA6 126 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 GXYLT1Q4G148 440 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 AKIRIN2Q53H80 203 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 RAET1LQ5VY80 246 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 DHRS11Q6UWP2 260 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 TMPPEQ6ZT21 453 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 MCHR2Q969V1 340 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF775Q96BV0 537 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 SNRNP40Q96DI7 357 aaKnown RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 PFDN5Q99471 154 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 ATG5Q9H1Y0 275 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 TMPRSS5Q9H3S3 457 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 CHMP1AQ9HD42 196 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 RYDENQ9NUL5 291 aaKnown RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 TREM2Q9NZC2 230 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 HEATR5AQ86XA9 2040 aa11.16□□□□□ -0.62
VANGL1-201ENST00000310260 SPENQ96T58 3664 aaKnown RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
VANGL1-201ENST00000310260 DNAJC13O75165 2243 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
VANGL1-201ENST00000310260 BLOC1S5-TXNDC5H3BN57 136 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 MFNGO00587 321 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 CYB5AP00167 134 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 TACSTD2P09758 323 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 ACKR3P25106 362 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 PSMB6P28072 239 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 LPAR6P43657 344 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 HTR5AP47898 357 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 HSF1Q00613 529 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 FAM166AQ6J272 317 aa11.15□□□□□ -0.62
VANGL1-201ENST00000310260 RHOUQ7L0Q8 258 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms