RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TNFAIP8L1Q8WVP5 186 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 SNAPC3Q92966 411 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ARHGAP5-AS1Q96IT6 56 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 HYLS1Q96M11 299 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 C1QTNF5Q9BXJ0 243 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 PIPOXQ9P0Z9 390 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ZNF69Q9UC07 566 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 CEP250Q9BV73 2442 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 SNRPGP15A8MWD9 76 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 MFNGO00587 321 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 SCGNO76038 276 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 RLN1P04808 185 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 MGMTP16455 207 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 OR8B8Q15620 311 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 NKPD1Q17RQ9 610 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 CHMP1BQ7LBR1 199 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 CD163Q86VB7 1156 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 MUC20Q8N307 709 aaPredicted RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 BPIFB2Q8N4F0 458 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ASCC1Q8N9N2 400 aaKnown RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 SPSB4Q96A44 273 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 POFUT1Q9H488 388 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ANAPC10Q9UM13 185 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 DOCK7Q96N67 2140 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 OR6C65A6NJZ3 312 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 EFSO43281 561 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 IL18BPO95998 194 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 CSN2P05814 226 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 CEACAM1P13688 526 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 SERPINA2P20848 420 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 AGTR1P30556 359 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 MTCP1P56278 107 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 UBE2MP61081 183 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 SPICQ8N5J4 248 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 PNLDC1Q8NA58 520 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 OR51T1Q8NGJ9 327 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 PRDM14Q9GZV8 571 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 RGCCQ9H4X1 137 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 C12orf49Q9H741 205 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 GHRLQ9UBU3 117 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 MGAT4AQ9UM21 535 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ARHGAP21Q5T5U3 1957 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 TNRC6AQ8NDV7 1962 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 DSPP15924 2871 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 FAM230AA0A1W2PPH8 454 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 SLC22A20A6NK97 555 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 SPRY1O43609 319 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 CREBL2O60519 120 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 IGHG3P01860 377 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 GSTP1P09211 210 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 HRH1P35367 487 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ATPAF1Q5TC12 328 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 ZNF100Q8IYN0 542 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 OR56B1Q8NGI3 324 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 GRPEL2Q8TAA5 225 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 SPSB1Q96BD6 273 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 TM2D1Q9BX74 207 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 CST11Q9H112 138 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ALX4Q9H161 411 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 SLC2A8Q9NY64 477 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 CRIM1Q9NZV1 1036 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ZNF581Q9P0T4 197 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 UPB1Q9UBR1 384 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ATPIF1Q9UII2 106 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 HSPB11Q9Y547 144 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 IGKV1-12A0A0C4DH73 117 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ANGPTL7O43827 346 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 NRASP01111 189 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 IGKV1D-12P01611 117 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 MPZP25189 248 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 NOVA1P51513 510 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 H2BFSP57053 126 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 CXADRP78310 365 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 DEFB109BQ30KR1 87 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 HIKESHIQ53FT3 197 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 CLVS2Q5SYC1 327 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 C17orf107Q6ZR85 190 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 SUN5Q8TC36 379 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 FBXW5Q969U6 566 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 SLC25A21Q9BQT8 299 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 URM1Q9BTM9 101 aaKnown RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 CHIAQ9BZP6 476 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 RANBP3Q9H6Z4 567 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 FN3KRPQ9HA64 309 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 GPN1Q9HCN4 374 aaPredicted RBP5.67□□□□□ -1.5
USP47-201ENST00000305481 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.67□□□□□ -1.5
USP47-201ENST00000305481 MGAT4CQ9UBM8 478 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 ZNF391Q9UJN7 358 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 VSIG4Q9Y279 399 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 MED12LQ86YW9 2145 aa5.67□□□□□ -1.5
USP47-201ENST00000305481 TMEM82A0PJX8 343 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 C5orf49A4QMS7 147 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 OR2AT4A6NND4 320 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 OR2A4O95047 310 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 PMP2P02689 132 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 CCNOP22674 350 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 GNG2P59768 71 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 RAB1AP62820 205 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 MICBQ29980 383 aa5.66□□□□□ -1.5
USP47-201ENST00000305481 SCGB2B2Q4G0G5 96 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms