RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 METTL9Q9H1A3 318 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 OPA3Q9H6K4 179 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 IL36GQ9NZH8 169 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 MGAT4CQ9UBM8 478 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 KCNN3Q9UGI6 736 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 KCNK7Q9Y2U2 307 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 A0A1W2PP11 408 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SS18L1O75177 396 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SDHBP21912 280 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 OR3A2P47893 321 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 RBP2P50120 134 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 CLN3Q13286 438 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 GK2Q14410 553 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 MPPED2Q15777 294 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 VAX1Q5SQQ9 334 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 FBXW9Q5XUX1 488 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 NLRC3Q7RTR2 1065 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 PXT1Q8NFP0 134 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 OR13C8Q8NGS7 320 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 ZNF431Q8TF32 576 aaPredicted RBP16.86■□□□□ 0.29
HOXC4-201ENST00000303406 BORCS8Q96FH0 119 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 SLC7A11Q9UPY5 501 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 BOLA1Q9Y3E2 137 aa16.86■□□□□ 0.29
HOXC4-201ENST00000303406 WDFY4Q6ZS81 3184 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 AQP7O14520 342 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 DNASE1P24855 282 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 NOVA1P51513 510 aaKnown RBP16.85■□□□□ 0.29
HOXC4-201ENST00000303406 ATP1B3P54709 279 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 RAP2BP61225 183 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 Q5BKY6 102 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 PLXDC2Q6UX71 529 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 OR4S1Q8NGB4 309 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 OR5D18Q8NGL1 313 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 OR1K1Q8NGR3 316 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 NANOS1Q8WY41 292 aaKnown RBP16.85■□□□□ 0.29
HOXC4-201ENST00000303406 ST8SIA4Q92187 359 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 APOBEC3DQ96AK3 386 aaPredicted RBP16.85■□□□□ 0.29
HOXC4-201ENST00000303406 ARHGAP5-AS1Q96IT6 56 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 Q96M66 194 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 REPIN1Q9BWE0 567 aaKnown RBP16.85■□□□□ 0.29
HOXC4-201ENST00000303406 FAM86C1Q9NVL1 165 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 CLCF1Q9UBD9 225 aa16.85■□□□□ 0.29
HOXC4-201ENST00000303406 LOC100509620A0A075B734 347 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 H3BUI4 141 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 AKR7A2O43488 359 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 SERPINA2P20848 420 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 FOXG1P55316 489 aaPredicted RBP16.84■□□□□ 0.29
HOXC4-201ENST00000303406 PLP2Q04941 152 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 CAMK2BQ13554 666 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 ATPAF1Q5TC12 328 aaPredicted RBP16.84■□□□□ 0.29
HOXC4-201ENST00000303406 ARRDC1Q8N5I2 433 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 GVQW1Q8N7I0 195 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 GRPEL2Q8TAA5 225 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 MRPS24Q96EL2 167 aaKnown RBP16.84■□□□□ 0.29
HOXC4-201ENST00000303406 PECRQ9BY49 303 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 POFUT1Q9H488 388 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 PCDHB16Q9NRJ7 776 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 CSAG2Q9Y5P2 127 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 CNTRLQ7Z7A1 2325 aa16.84■□□□□ 0.29
HOXC4-201ENST00000303406 A0A0C4DFX4 3053 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 A0A096LPE4 126 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 A0A1W2PPZ6 126 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 HLA-HP01893 362 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 TMEM225BP0DP42 221 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 RAB1AP62820 205 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 CXADRP78310 365 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 DHODHQ02127 395 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 MALLQ13021 153 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 RSPO4Q2I0M5 234 aaPredicted RBP16.83■□□□□ 0.28
HOXC4-201ENST00000303406 FAHD2BQ6P2I3 314 aaPredicted RBP16.83■□□□□ 0.28
HOXC4-201ENST00000303406 HOGA1Q86XE5 327 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 OR2AK2Q8NG84 335 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 OR4K15Q8NH41 348 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 BCL2L2Q92843 193 aaPredicted RBP16.83■□□□□ 0.28
HOXC4-201ENST00000303406 FAHD2AQ96GK7 314 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 POM121L2Q96KW2 1035 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 PIPOXQ9P0Z9 390 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 PRSS50Q9UI38 385 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 HSF4Q9ULV5 492 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 MGAT4AQ9UM21 535 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 HSPB11Q9Y547 144 aa16.83■□□□□ 0.28
HOXC4-201ENST00000303406 RAD51DO75771 328 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 FCER2P06734 321 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 OR4E1P0C645 316 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 BLVRBP30043 206 aaPredicted RBP16.82■□□□□ 0.28
HOXC4-201ENST00000303406 HRH1P35367 487 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 C9orf135Q5VTT2 229 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 P4HA3Q7Z4N8 544 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 MUC20Q8N307 709 aaPredicted RBP16.82■□□□□ 0.28
HOXC4-201ENST00000303406 ZSCAN4Q8NAM6 433 aaPredicted RBP16.82■□□□□ 0.28
HOXC4-201ENST00000303406 CSNK2A3Q8NEV1 391 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 OR2T35Q8NGX2 323 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 SNAPC3Q92966 411 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 GPR137Q96N19 417 aa16.82■□□□□ 0.28
HOXC4-201ENST00000303406 EIF3KQ9UBQ5 218 aaKnown RBP16.82■□□□□ 0.28
HOXC4-201ENST00000303406 IGKV1-27A0A075B6S5 117 aa16.81■□□□□ 0.28
HOXC4-201ENST00000303406 FAM230AA0A1W2PPH8 454 aa16.81■□□□□ 0.28
HOXC4-201ENST00000303406 CEACAM18A8MTB9 384 aa16.81■□□□□ 0.28
HOXC4-201ENST00000303406 G3V3Q6 166 aa16.81■□□□□ 0.28
HOXC4-201ENST00000303406 RGS11O94810 467 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms