RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 OR14K1Q8NGZ2 314 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BHQ93079 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 FAM71F1Q96KD3 344 aaPredicted RBP11.51□□□□□ -0.57
TVP23A-201ENST00000299866 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BNQ99877 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HIST1H2BMQ99879 126 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 PRODH2Q9UF12 536 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 HS3ST3B1Q9Y662 390 aa11.51□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF587BE7ETH6 402 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 H0YIG0 161 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 H0YL77 283 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 H3BQ15 152 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 GIMD1P0DJR0 217 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 PPM1FP49593 454 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 NHLH2Q02577 135 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 HAGHQ16775 308 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 WDFY1Q8IWB7 410 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 SGPP2Q8IWX5 399 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 MMABQ96EY8 250 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 REEP6Q96HR9 211 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 CLDN16Q9Y5I7 305 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 TMED7-TICAM2A0A0A6YYA0 188 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ARGFXA6NJG6 315 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 TSTD3H0UI37 97 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 TAS2R60P59551 318 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 LSM6P62312 80 aaKnown RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF542PQ5EBM4 170 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 OR2T2Q6IF00 324 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 DBX2Q6ZNG2 339 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 SULF2Q8IWU5 870 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 GALNT14Q96FL9 552 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 SCARF2Q96GP6 870 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 LURAP1Q96LR2 239 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 FAM206AQ9NX38 181 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 MED29Q9NX70 200 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 PLPP3O14495 311 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 TERTO14746 1132 aaKnown RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 IL33O95760 270 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 QDPRP09417 244 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 CTNNB1P35222 781 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 RABIFP47224 123 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 TMEM31Q5JXX7 168 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF776Q68DI1 518 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ABHD12BQ7Z5M8 362 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF248Q8NDW4 579 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF2Q9BSG1 426 aaPredicted RBP11.5□□□□□ -0.57
TVP23A-201ENST00000299866 ABHD14AQ9BUJ0 271 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 EMC6Q9BV81 110 aa11.5□□□□□ -0.57
TVP23A-201ENST00000299866 CHD7Q9P2D1 2997 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 CDRT15L2A8MXV6 281 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 FKTNO75072 461 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 FCARP24071 287 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 AFF3P51826 1226 aaKnown RBP11.49□□□□□ -0.57
TVP23A-201ENST00000299866 ERVFRD-1P60508 538 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 CA5BP1Q8WTZ4 195 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 WDR92Q96MX6 357 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 ZNF700Q9H0M5 742 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 PLEKHA2Q9HB19 425 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 ELL3Q9HB65 397 aaPredicted RBP11.49□□□□□ -0.57
TVP23A-201ENST00000299866 TMEM184BQ9Y519 407 aaPredicted RBP11.49□□□□□ -0.57
TVP23A-201ENST00000299866 SEC16AO15027 2179 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 IGKV1D-8A0A087WSZ0 117 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 NPIPA5E9PKD4 350 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 BLVRBP30043 206 aaPredicted RBP11.49□□□□□ -0.57
TVP23A-201ENST00000299866 MMP16P51512 607 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 UCP2P55851 309 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 SLC26A5P58743 744 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 PKIAP61925 76 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 ELOBQ15370 118 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 UBE2V2Q15819 145 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 DAZLQ92904 295 aaKnown RBP11.49□□□□□ -0.57
TVP23A-201ENST00000299866 CPNE4Q96A23 557 aaPredicted RBP11.49□□□□□ -0.57
TVP23A-201ENST00000299866 NPIPA1Q9UND3 350 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 PCNX3Q9H6A9 2034 aa11.49□□□□□ -0.57
TVP23A-201ENST00000299866 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
TVP23A-201ENST00000299866 AHSA1O95433 338 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 MT-ATP6P00846 226 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 LINC00271P0C7V0 271 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 MAS1LP35410 378 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 APOBEC1P41238 236 aaKnown RBP11.48□□□□□ -0.57
TVP23A-201ENST00000299866 TAS2R46P59540 309 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 TOMM40LQ969M1 308 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 URM1Q9BTM9 101 aaKnown RBP11.48□□□□□ -0.57
TVP23A-201ENST00000299866 TBL1XR1Q9BZK7 514 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 OR10A2Q9H208 303 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 CRLF2Q9HC73 371 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 A6NCN8 305 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 E5RGE8 158 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 CLPSP04118 112 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 P2RY1P47900 373 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 DLK1P80370 383 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 NFATC4Q14934 902 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 OR5AS1Q8N127 324 aa11.48□□□□□ -0.57
TVP23A-201ENST00000299866 ZFP62Q8NB50 900 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms