RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PHC2Q8IXK0 858 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 PTP4A1Q93096 173 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 DOK1Q99704 481 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 FAM53CQ9NYF3 392 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 SHPKQ9UHJ6 478 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 DIMT1Q9UNQ2 313 aaKnown RBP6.33□□□□□ -1.4
RAG1-201ENST00000299440 RPS10-NUDT3A0A1W2PQS6 291 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 TCRBV3S1A0A5B6 114 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 TMEM235A6NFC5 223 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 HNRNPFP52597 415 aaKnown RBP6.33□□□□□ -1.4
RAG1-201ENST00000299440 NUBP1P53384 320 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 WNT3P56703 355 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 SORDQ00796 357 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 GPNMBQ14956 572 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 HSD17B11Q8NBQ5 300 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 OR6K3Q8NGY3 331 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 DPH3Q96FX2 82 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 C10orf90Q96M02 699 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 TMEM56Q96MV1 263 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 PPIL3Q9H2H8 161 aaKnown RBP6.33□□□□□ -1.4
RAG1-201ENST00000299440 BCL2L10Q9HD36 194 aa6.33□□□□□ -1.4
RAG1-201ENST00000299440 BRWD3Q6RI45 1802 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 IGLV3-16A0A075B6K0 115 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 GMDSO60547 372 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 FAM198BQ6UWH4 519 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 ASCL5Q7RTU5 278 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 NUDCD2Q8WVJ2 157 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 ZNF665Q9H7R5 613 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 INSIG2Q9Y5U4 225 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 K7ESF4 209 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 SBK3P0C264 359 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 CLDN20P56880 219 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 FUT7Q11130 342 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 DCAF12L2Q5VW00 463 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 DESI1Q6ICB0 168 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 SUMF2Q8NBJ7 301 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 OR5M8Q8NGP6 311 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 ORAI1Q96D31 301 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 C19orf12Q9NSK7 152 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 SIRT3Q9NTG7 399 aaPredicted RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 UBR3Q6ZT12 1888 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 KRASP01116 189 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 GYPAP02724 150 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 TPT1P13693 172 aaKnown RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 PI3P19957 117 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 VDAC1P21796 283 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 INO80CQ6PI98 192 aaPredicted RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 FUNDC1Q8IVP5 155 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 MUC20Q8N307 709 aaPredicted RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 SF3B6Q9Y3B4 125 aaKnown RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 ACP1P24666 158 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 NKX2-1P43699 371 aaPredicted RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 SLC37A1P57057 533 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 HLXQ14774 488 aaPredicted RBP6.32□□□□□ -1.4
RAG1-201ENST00000299440 TMEM268Q5VZI3 342 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 OR14K1Q8NGZ2 314 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 HRH4Q9H3N8 390 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 AUP1Q9Y679 476 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 TCRBV16S1A1N1A0A5B0 115 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 F5H697 171 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 TGFAP01135 160 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 IL5P05113 134 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 PTGFRP43088 359 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 OR3A1P47881 315 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 FAM219BQ5XKK7 198 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 SSX7Q7RTT5 188 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 CCDC190Q86UF4 302 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 C9orf40Q8IXQ3 194 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 OR2M3Q8NG83 312 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 OR52L2PQ8NGH6 319 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 OR6C3Q9NZP0 311 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 ICE1Q9Y2F5 2266 aa6.32□□□□□ -1.4
RAG1-201ENST00000299440 MYH15Q9Y2K3 1946 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 MPZL1O95297 269 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 ALPLP05186 524 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 CYC1P08574 325 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 CHATP28329 748 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 BAMBIQ13145 260 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 DOC2BQ14184 412 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 CD226Q15762 336 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 ZNF260Q3ZCT1 412 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 ZNF425Q6IV72 752 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 PRSS45Q7RTY3 260 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 ZNF418Q8TF45 676 aaPredicted RBP6.31□□□□□ -1.4
RAG1-201ENST00000299440 CLDN23Q96B33 292 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 ANKRD60Q9BZ19 345 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 OR51J1Q9H342 316 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 SLC25A22Q9H936 323 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 GPR35Q9HC97 309 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 SLC25A10Q9UBX3 287 aaPredicted RBP6.31□□□□□ -1.4
RAG1-201ENST00000299440 ETV7Q9Y603 341 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 SVILO95425 2214 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 A0A1B0GTL3 188 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 SSSCA1O60232 199 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 CD160O95971 181 aa6.31□□□□□ -1.4
RAG1-201ENST00000299440 APOC3P02656 99 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms