RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 SPEM2Q0P670 501 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ADIRFQ15847 76 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 AADACL3Q5VUY0 350 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 CHRDL2Q6WN34 429 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 OR5L1Q8NGL2 311 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 OR13G1Q8NGZ3 307 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 STT3BQ8TCJ2 826 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MRGPRX3Q96LB0 322 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF2Q9BSG1 426 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MENTQ9BUN1 341 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 VN1R1Q9GZP7 353 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MAGT1Q9H0U3 335 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 GPR173Q9NS66 373 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MRPS28Q9Y2Q9 187 aaKnown RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 HCRTR2O43614 444 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ACRP10323 421 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 MPZP25189 248 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 GPR157Q5UAW9 335 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 OGFOD3Q6PK18 319 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 OR2L8Q8NGY9 312 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 FOXQ1Q9C009 403 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 WFDC1Q9HC57 220 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 TUBG2Q9NRH3 451 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 PPP1R14DQ9NXH3 145 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 MTCL1Q9Y4B5 1905 aaKnown RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 FAM230AA0A1W2PPH8 454 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 DHRS7CA6NNS2 312 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 C17orf51A8MQB3 221 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 SLC31A1O15431 190 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 NUDT21O43809 227 aaKnown RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 GPR137BO60478 399 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 CST7O76096 145 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ONECUT2O95948 504 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 AMBPP02760 352 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 CTLA4P16410 223 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 RPS4Y1P22090 263 aaKnown RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 FPR2P25090 351 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 SLC25A1P53007 311 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 H3F3AP84243 136 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 PSG6Q00889 435 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 RUNX1Q01196 453 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 GNMTQ14749 295 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ISXQ2M1V0 245 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 SLC22A24Q8N4F4 322 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 SERINC2Q96SA4 455 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 RTBDNQ9BSG5 229 aaPredicted RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 MMP25Q9NPA2 562 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 CHST11Q9NPF2 352 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF850A8MQ14 1090 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 DEDDO75618 318 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 CST2P09228 141 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 FOLR1P15328 257 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 BCKDHBP21953 392 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 PTGER4P35408 488 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 CCR2P41597 374 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 POLR2HP52434 150 aaKnown RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 SLC7A9P82251 487 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 JOSD1Q15040 202 aaPredicted RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ACKR1Q16570 336 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 PHF19Q5T6S3 580 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ERN2Q76MJ5 926 aaKnown RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 Q7L0L9 218 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 SFTPA1Q8IWL2 248 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 LFNGQ8NES3 379 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 DEFB118Q96PH6 123 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 ADAM19Q9H013 955 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 PITPNC1Q9UKF7 332 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 NXT1Q9UKK6 140 aaKnown RBP9.03□□□□□ -0.96
CLDN1-201ENST00000295522 TMED3Q9Y3Q3 217 aa9.03□□□□□ -0.96
CLDN1-201ENST00000295522 F5P12259 2224 aa9.02□□□□□ -0.96
CLDN1-201ENST00000295522 CDC14CA4D256 554 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 FAM24AA6NFZ4 105 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 TLCD2A6NGC4 264 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 E5RGE8 158 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 SPINT1O43278 529 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 SEC11BP0C7V7 166 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 GABRR1P24046 479 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 BLVRBP30043 206 aaPredicted RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 PEBP1P30086 187 aaKnown RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 TFPI2P48307 235 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 RAB38P57729 211 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 RPS4XP62701 263 aaKnown RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 MRPS34P82930 218 aaKnown RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 FMODQ06828 376 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 TRA2AQ13595 282 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 LCN15Q6UWW0 184 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 ABHD12BQ7Z5M8 362 aaPredicted RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 KREMEN2Q8NCW0 462 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 OR10J5Q8NHC4 309 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 ADAMTS18Q8TE60 1221 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 SLC22A18Q96BI1 424 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 FOXD3Q9UJU5 478 aaPredicted RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 NSG2Q9Y328 171 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 TICRRQ7Z2Z1 1910 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 LINC01553A4QN01 128 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 CTSVO60911 334 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms