RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 MICBQ29980 383 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 PABPC1L2AQ5JQF8 200 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 PDSS1Q5T2R2 415 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.61■□□□□ 0.25
SHF-201ENST00000290894 CPEB3Q8NE35 698 aaKnown RBP16.61■□□□□ 0.25
SHF-201ENST00000290894 CST11Q9H112 138 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 DEFB127Q9H1M4 99 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 PARD6AQ9NPB6 346 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 FXYD6-FXYD2A0A087WZ82 144 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 F5H5P2 479 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 IFNA6P05013 189 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 ZNF708P17019 499 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 RPS27AP62979 156 aaKnown RBP16.61■□□□□ 0.25
SHF-201ENST00000290894 BATF2Q8N1L9 274 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 ADAD2Q8NCV1 583 aaKnown RBP16.61■□□□□ 0.25
SHF-201ENST00000290894 OR56B1Q8NGI3 324 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 HAS2Q92819 552 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 RADILQ96JH8 1075 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 PRRT1Q99946 306 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 URM1Q9BTM9 101 aaKnown RBP16.61■□□□□ 0.25
SHF-201ENST00000290894 FXYD6Q9H0Q3 95 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 FN3KRPQ9HA64 309 aa16.61■□□□□ 0.25
SHF-201ENST00000290894 MAP1BP46821 2468 aaKnown RBP16.6■□□□□ 0.25
SHF-201ENST00000290894 IGKV1-27A0A075B6S5 117 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 HLA-HP01893 362 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 AKR1C4P17516 323 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 PPIAP62937 165 aaKnown RBP16.6■□□□□ 0.25
SHF-201ENST00000290894 ARF1P84077 181 aaKnown RBP16.6■□□□□ 0.25
SHF-201ENST00000290894 ZNF92Q03936 586 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 CDH26Q8IXH8 852 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 C12orf45Q8N5I9 185 aaPredicted RBP16.6■□□□□ 0.25
SHF-201ENST00000290894 CCDC107Q8WV48 283 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 ZNF587BE7ETH6 402 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 SCGNO76038 276 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 SP1P08047 785 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 OR3A3P47888 321 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 PPP1R1AQ13522 171 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 NKAPLQ5M9Q1 402 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 RIPPLY2Q5TAB7 128 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 SUMF1Q8NBK3 374 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 MARCH1Q8TCQ1 289 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 CASTOR1Q8WTX7 329 aa16.6■□□□□ 0.25
SHF-201ENST00000290894 NOP16Q9Y3C1 178 aaKnown RBP16.6■□□□□ 0.25
SHF-201ENST00000290894 PLSCR5A0PG75 271 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 SDCBPO00560 298 aaPredicted RBP16.59■□□□□ 0.25
SHF-201ENST00000290894 MFNGO00587 321 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 PI3P19957 117 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 VAMP1P23763 118 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 C6orf201Q7Z4U5 140 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 ZNF503-AS2A6NEH8 195 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 SORDQ00796 357 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 RIPPLY1Q0D2K3 151 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 STEAP2Q8NFT2 490 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 FER1L6-AS2Q96M78 137 aa16.59■□□□□ 0.25
SHF-201ENST00000290894 CLEC4MQ9H2X3 399 aaPredicted RBP16.59■□□□□ 0.25
SHF-201ENST00000290894 ZNF107Q9UII5 783 aaPredicted RBP16.59■□□□□ 0.25
SHF-201ENST00000290894 M0R233 179 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 SYNGR4O95473 234 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 GSTP1P09211 210 aaKnown RBP16.58■□□□□ 0.25
SHF-201ENST00000290894 NFYAP23511 347 aaPredicted RBP16.58■□□□□ 0.25
SHF-201ENST00000290894 GSK3AP49840 483 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 BAMBIQ13145 260 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 EXOSC2Q13868 293 aaKnown RBP16.58■□□□□ 0.25
SHF-201ENST00000290894 LRRC37A5PQ49AS3 106 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 LY6G6FQ5SQ64 297 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 SEC22AQ96IW7 307 aa16.58■□□□□ 0.25
SHF-201ENST00000290894 HDHD3Q9BSH5 251 aaPredicted RBP16.58■□□□□ 0.25
SHF-201ENST00000290894 ALX4Q9H161 411 aaPredicted RBP16.58■□□□□ 0.25
SHF-201ENST00000290894 RGS11O94810 467 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 HTR3BO95264 441 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 FARS2O95363 451 aaKnown RBP16.58■□□□□ 0.24
SHF-201ENST00000290894 MMP7P09237 267 aaPredicted RBP16.58■□□□□ 0.24
SHF-201ENST00000290894 UBBP0CG47 229 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 NPY4RP50391 375 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 AP2S1P53680 142 aaPredicted RBP16.58■□□□□ 0.24
SHF-201ENST00000290894 PMP22Q01453 160 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 RNFT1Q5M7Z0 435 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 C12orf49Q9H741 205 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 B3GNT2Q9NY97 397 aa16.58■□□□□ 0.24
SHF-201ENST00000290894 MCTS1Q9ULC4 181 aaKnown RBP16.58■□□□□ 0.24
SHF-201ENST00000290894 H3BUI4 141 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 L7N2F9 121 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 NKX2-8O15522 239 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 EDN3P14138 238 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 ARG2P78540 354 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 BRICD5Q6PL45 260 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 ST8SIA4Q92187 359 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 ZNF701Q9NV72 531 aaPredicted RBP16.57■□□□□ 0.24
SHF-201ENST00000290894 NME2P1O60361 137 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 SPINK2P20155 84 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 NME2P22392 152 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 CD34P28906 385 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 FAM3AP98173 230 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 OPCMLQ14982 345 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 TAF9Q16594 264 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 KMT2EQ8IZD2 1858 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 MDS2Q8NDY4 140 aa16.57■□□□□ 0.24
SHF-201ENST00000290894 PIGCQ92535 297 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms