RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SIGLEC8Q9NYZ4 499 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 OR1A1Q9P1Q5 309 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ZNF532Q9HCE3 1301 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ZNF487B1APH4 448 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ANKRD65E5RJM6 399 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 SEMA4FO95754 770 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 PAK4O96013 591 aaPredicted RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 PSMB6P28072 239 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ELAVL2Q12926 359 aaKnown RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 ZNF57Q68EA5 555 aaPredicted RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 MED27Q6P2C8 311 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 LHFPL3Q86UP9 236 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 UBL4BQ8N7F7 174 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 OR6K3Q8NGY3 331 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ACTL9Q8TC94 416 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 DCUN1D4Q92564 292 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 HCAR1Q9BXC0 346 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 IMP3Q9NV31 184 aaKnown RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 SLC5A10A0PJK1 596 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 TSTD3H0UI37 97 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 K7EN84 100 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 MAGEB4O15481 346 aaPredicted RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 GMDSO60547 372 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 NOS1APO75052 506 aaPredicted RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 CNIH1O95406 144 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ANOS1P23352 680 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 COX7A1P24310 79 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 HTR1DP28221 377 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ADORA1P30542 326 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 PYCR1P32322 319 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 GALR1P47211 349 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 INHBCP55103 352 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 UNC119Q13432 240 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 MTF1Q14872 753 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 PTGES3Q15185 160 aaKnown RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 NSDHLQ15738 373 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ARHGAP11BQ3KRB8 267 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 SYT6Q5T7P8 510 aaPredicted RBP2.28□□□□□ -2.04
CHD1-201ENST00000284049 GID4Q8IVV7 300 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 STPG2Q8N412 459 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 RAD51AP1Q96B01 352 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 C1QTNF4Q9BXJ3 329 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 CD209Q9NNX6 404 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ENY2Q9NPA8 101 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 XPNPEP1Q9NQW7 623 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 ARMCX1Q9P291 453 aa2.28□□□□□ -2.04
CHD1-201ENST00000284049 F5H5T6 163 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 NPIPB9F8W1W9 429 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.28□□□□□ -2.05
CHD1-201ENST00000284049 FABP1P07148 127 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 WNT2P09544 360 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 CTXN2P0C2S0 81 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 PSKH1P11801 424 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 CD99P14209 185 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 TEAD1P28347 426 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 SERPINB1P30740 379 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 PPOXP50336 477 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 RAB38P57729 211 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 NDUFA5Q16718 116 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 DGUOKQ16854 277 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 CALHM1Q8IU99 346 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 OR51G1Q8NGK1 321 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 OR2T11Q8NH01 316 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 SMIM12Q96EX1 92 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 ATF6BQ99941 703 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 FAAP24Q9BTP7 215 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 TMED9Q9BVK6 235 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 GLIPR2Q9H4G4 154 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 THAP10Q9P2Z0 257 aaPredicted RBP2.28□□□□□ -2.05
CHD1-201ENST00000284049 RIMS3Q9UJD0 308 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 ZNF225Q9UK10 706 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 TRAPPC4Q9Y296 219 aa2.28□□□□□ -2.05
CHD1-201ENST00000284049 MYH8P13535 1937 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 MPZL2O60487 215 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 SHOX2O60902 331 aaPredicted RBP2.27□□□□□ -2.05
CHD1-201ENST00000284049 HPRT1P00492 218 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 CSF3P09919 207 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 TFPI2P48307 235 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 HNRNPA3P51991 378 aaKnown RBP2.27□□□□□ -2.05
CHD1-201ENST00000284049 DLX6P56179 175 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 ACSM3Q53FZ2 586 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 Q6ZSR6 202 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 GGNQ86UU5 652 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 RIBC1Q8N443 379 aaPredicted RBP2.27□□□□□ -2.05
CHD1-201ENST00000284049 ZNF114Q8NC26 417 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 TIPINQ9BVW5 301 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 CDCA4Q9BXL8 241 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 OPTCQ9UBM4 332 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 NDRG2Q9UN36 371 aaKnown RBP2.27□□□□□ -2.05
CHD1-201ENST00000284049 HEBP2Q9Y5Z4 205 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.27□□□□□ -2.05
CHD1-201ENST00000284049 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.27□□□□□ -2.05
CHD1-201ENST00000284049 M0QXV9 152 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 PLPP3O14495 311 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 RAMP1O60894 148 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 CEACAM4O75871 244 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 TOXO94900 526 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 GABARAPO95166 117 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 CD1EP15812 388 aa2.27□□□□□ -2.05
CHD1-201ENST00000284049 GDF1P27539 372 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms