RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SURF2Q15527 256 aaPredicted RBP9.11□□□□□ -0.95
UPF3B-201ENST00000276201 CD226Q15762 336 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 DEFB109BQ30KR1 87 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 FAM76BQ5HYJ3 339 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 C5orf46Q6UWT4 87 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 MED25Q71SY5 747 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 KCTD9Q7L273 389 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 NAA40Q86UY6 237 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 LHFPL1Q86WI0 220 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 OR10R2Q8NGX6 335 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 C2CD4CQ8TF44 421 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 TMEM230Q96A57 120 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 TMEM41AQ96HV5 264 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 KIRREL1Q96J84 757 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
UPF3B-201ENST00000276201 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.11□□□□□ -0.95
UPF3B-201ENST00000276201 OR52A1Q9UKL2 312 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 ATMQ13315 3056 aa9.11□□□□□ -0.95
UPF3B-201ENST00000276201 A0A0A6YYC8 382 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 A0A1B0GW64 132 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 A0A1W2PQD3 144 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 I3L1I5 382 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 SCDO00767 359 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OR2T1O43869 369 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 ICOSLGO75144 302 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OR6A2O95222 327 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 GLAP06280 429 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 FBP1P09467 338 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 HKR1P10072 659 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 FBLP22087 321 aaKnown RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 VAMP1P23763 118 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 LPAR6P43657 344 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 MMP16P51512 607 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 UNC119Q13432 240 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 EIF2B1Q14232 305 aaKnown RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 ODF4Q2M2E3 257 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 DNLZQ5SXM8 178 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 JAGN1Q8N5M9 183 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OR51A2Q8NGJ7 313 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OR2Y1Q8NGV0 311 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 CASTOR1Q8WTX7 329 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 TCTEX1D2Q8WW35 142 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 MVB12AQ96EY5 273 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 PRTFDC1Q9NRG1 225 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 PTRH2Q9Y3E5 179 aaKnown RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 PCSK5Q92824 1860 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 CLDN4O14493 209 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 ATXN7O15265 892 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 NPIPB7O75200 414 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 UMODP07911 640 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 SPARCP09486 303 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 PRF1P14222 555 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 FOLR3P41439 243 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 GLP1RP43220 463 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 SUCLG1P53597 346 aaKnown RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 HSD17B7P56937 341 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 RAB1AP62820 205 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OPN5Q6U736 354 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 ACBD4Q8NC06 268 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OR9A4Q8NGU2 314 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 OR4K15Q8NH41 348 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 METTL21AQ8WXB1 218 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 WNT2BQ93097 391 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 MMABQ96EY8 250 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-201ENST00000276201 SPSB2Q99619 263 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 WDR54Q9H977 334 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 PIEZO2Q9H5I5 2752 aa9.1□□□□□ -0.95
UPF3B-201ENST00000276201 C13orf42A0A1B0GVH6 325 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 OR2W5A6NFC9 320 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 MSGN1A6NI15 193 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 A6NIZ1 184 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 VSTM2BA6NLU5 285 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 HRKO00198 91 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 JTBO76095 146 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 VSIG8P0DPA2 414 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 AKR1C4P17516 323 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 LMO1P25800 156 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ECI1P42126 302 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 RPS27P42677 84 aaKnown RBP9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ZNF84P51523 738 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 RAP1BP61224 184 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 RAP1AP62834 184 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SPOCK1Q08629 439 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 RHEBQ15382 184 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ACKR1Q16570 336 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 IGSF11Q5DX21 431 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 DNM1P34Q6PK57 102 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 DHRS11Q6UWP2 260 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SHISA6Q6ZSJ9 500 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SHISA5Q8N114 240 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 MARCH1Q8TCQ1 289 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 C14orf79Q96F83 325 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SULT4A1Q9BR01 284 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SCRT1Q9BWW7 348 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 HRH4Q9H3N8 390 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 TMPRSS5Q9H3S3 457 aa9.09□□□□□ -0.95
UPF3B-201ENST00000276201 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms