RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 HLA-DRB5Q30154 266 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 FAM74A3Q4VXF1 159 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 MUC20Q8N307 709 aaPredicted RBP7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 DUSP18Q8NEJ0 188 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 OR5D13Q8NGL4 314 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 TTC9Q92623 222 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 SMIM12Q96EX1 92 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 SPACA5Q96QH8 159 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 FXYD1O00168 92 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 ICOSLGO75144 302 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 OR5C1Q8NGR4 320 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 PLPP2O43688 288 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 FCMRO60667 390 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 BCL3P20749 454 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 P2RY1P47900 373 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 HLA-BQ31612 363 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 PYCR3Q53H96 274 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 OR2C3Q8N628 320 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 SIRT6Q8N6T7 355 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 ANKLE1Q8NAG6 615 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 RLN3Q8WXF3 142 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 WBP2Q969T9 261 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 IGHA1P01876 353 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 IGHA2P01877 340 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 CD99P14209 185 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 C6orf15Q6UXA7 325 aaPredicted RBP7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 BATF2Q8N1L9 274 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 ADPRHL1Q8NDY3 354 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 VN1R2Q8NFZ6 395 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 MAP1LC3CQ9BXW4 147 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 EXOGQ9Y2C4 368 aaKnown RBP7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 UPK1AO00322 258 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 GSTZ1O43708 216 aaPredicted RBP7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 FUT7Q11130 342 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 PPP1R1AQ13522 171 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 RAB32Q13637 225 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 DEGS2Q6QHC5 323 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 RALYQ9UKM9 306 aaKnown RBP7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 ATP23Q9Y6H3 246 aa7.83□□□□□ -1.16
SCUBE3-201ENST00000274938 H3BP45 60 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 LINC01387J3KSC0 135 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 CTDSPLO15194 276 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 HLA-GP17693 338 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 GCSHP23434 173 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 PXNP49023 591 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 PRSS36Q5K4E3 855 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 LILRA3Q8N6C8 439 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 TMEM251Q8N6I4 163 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 TMEM116Q8NCL8 245 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 KLHDC9Q8NEP7 349 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 THOC3Q96J01 351 aaKnown RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 PARP4Q9UKK3 1724 aaKnown RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 C3orf85A0A1B0GTC6 90 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ADAM20O43506 726 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ONECUT2O95948 504 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ANKRD55Q3KP44 614 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 AWAT1Q58HT5 328 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 YRDCQ86U90 279 aaKnown RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR10G4Q8NGN3 311 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR10G9Q8NGN4 311 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR10G7Q8NGN6 311 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 NXF2Q9GZY0 626 aaKnown RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 PLEKHB1Q9UF11 243 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 UBR1Q8IWV7 1749 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 LRRC37A3O60309 1634 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ZNF25P17030 456 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 CSNK1EP49674 416 aaKnown RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR10A7Q8NGE5 316 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 GRAMD2BQ96HH9 432 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 TOX2Q96NM4 488 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 KCNK15Q9H427 330 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 IL20Q9NYY1 176 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 FAM208AQ9UK61 1670 aaKnown RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ZNF716A6NP11 495 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 IL2RAP01589 272 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 HTRA3P83110 453 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 NKAIN2Q5VXU1 208 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ANKRD34AQ69YU3 496 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 JMJD6Q6NYC1 403 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 KMT5CQ86Y97 462 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR13H1Q8NG92 308 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR1L1Q8NH94 360 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 NUMA1Q14980 2115 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 TBX19O60806 448 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 SP1P08047 785 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 CRYBB2P43320 205 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 LPAL2Q16609 132 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 OR5AU1Q8NGC0 362 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 NT5CQ8TCD5 201 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 MED29Q9NX70 200 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 FBXL17Q9UF56 701 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 TMEM272A0A1B0GTI8 110 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 ANKRD20A5PA0PJZ0 165 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 LINC00862A6NCI5 91 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 IGHV3-9P01782 118 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 TMEM267Q0VDI3 215 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 PRDX4Q13162 271 aa7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 MLF2Q15773 248 aaPredicted RBP7.82□□□□□ -1.16
SCUBE3-201ENST00000274938 KHDC1LQ5JSQ8 128 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms