RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 GUSBP1Q15486 140 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 PNLIPRP3Q17RR3 467 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 HIKESHIQ53FT3 197 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 ZBTB37Q5TC79 503 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 TMEM53Q6P2H8 277 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 IGFL3Q6UXB1 125 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 STEAP2Q8NFT2 490 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 OR51T1Q8NGJ9 327 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 REPIN1Q9BWE0 567 aaKnown RBP14.4□□□□□ -0.1
CCDC40-201ENST00000269318 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC40-201ENST00000269318 SLC2A8Q9NY64 477 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 BOLA1Q9Y3E2 137 aa14.4□□□□□ -0.1
CCDC40-201ENST00000269318 TNRC6AQ8NDV7 1962 aaKnown RBP14.39□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF816-ZNF321PA0A0X1KG74 233 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 FAM230AA0A1W2PPH8 454 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 ZNHIT1O43257 154 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 MEF2DQ14814 521 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 CDK10Q15131 360 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 OR52W1Q6IF63 320 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 ASCL4Q6XD76 172 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 IDO2Q6ZQW0 420 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 LHFPL2Q6ZUX7 228 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 P4HA3Q7Z4N8 544 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 DPPA2Q7Z7J5 298 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 BPIFB2Q8N4F0 458 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 CPNE2Q96FN4 548 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-201ENST00000269318 S100A13Q99584 98 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 SLC6A7Q99884 636 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 SLC25A21Q9BQT8 299 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-201ENST00000269318 GPN1Q9HCN4 374 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-201ENST00000269318 PLSCR3Q9NRY6 295 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 FRYQ5TBA9 3013 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 MYO7BQ6PIF6 2116 aa14.39□□□□□ -0.11
CCDC40-201ENST00000269318 CREBL2O60519 120 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-201ENST00000269318 NAT1P18440 290 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 CCNOP22674 350 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 RBP2P50120 134 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 GNG2P59768 71 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 GK2Q14410 553 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-201ENST00000269318 TFAP2EQ6VUC0 442 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 OR13C8Q8NGS7 320 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ZFAND1Q8TCF1 268 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 SNAPC3Q92966 411 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-201ENST00000269318 TECTBQ96PL2 329 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 TAAR6Q96RI8 345 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 IFT46Q9NQC8 304 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 RGS13O14921 159 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 RLN1P04808 185 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 TMEM225BP0DP42 221 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF169Q14929 603 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-201ENST00000269318 RNASE10Q5GAN6 216 aaKnown RBP14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ZADH2Q8N4Q0 377 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 OR52B4Q8NGK2 314 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 BORCS8Q96FH0 119 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF75AQ96N20 296 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 TRIB1Q96RU8 372 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ALX4Q9H161 411 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF69Q9UC07 566 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 KCNN3Q9UGI6 736 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 SCP2D1Q9UJQ7 156 aa14.38□□□□□ -0.11
CCDC40-201ENST00000269318 ANGPTL7O43827 346 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 TBPP20226 339 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 CPT2P23786 658 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 FUT6P51993 359 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 PLP2Q04941 152 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 SF3B4Q15427 424 aaKnown RBP eCLIP14.37□□□□□ -0.111e-7■■■■□ 25.6
CCDC40-201ENST00000269318 Q5BKY6 102 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 MED12LQ86YW9 2145 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 SPICQ8N5J4 248 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 ST8SIA4Q92187 359 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 PIGCQ92535 297 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 SARAFQ96BY9 339 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 HYLS1Q96M11 299 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 Q96M66 194 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 OCSTAMPQ9BR26 566 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 CHST6Q9GZX3 395 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 METTL9Q9H1A3 318 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 ELL3Q9HB65 397 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-201ENST00000269318 SPENQ96T58 3664 aaKnown RBP14.37□□□□□ -0.11
CCDC40-201ENST00000269318 CEP250Q9BV73 2442 aa14.37□□□□□ -0.11
CCDC40-201ENST00000269318 FAM172BPA6NC97 362 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 DISC1C4P0D8 188 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 KLK10O43240 276 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 SPRY1O43609 319 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-201ENST00000269318 BLVRBP30043 206 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-201ENST00000269318 HRH1P35367 487 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 ZMYND11Q15326 602 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 NKPD1Q17RQ9 610 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 LAMTOR1Q6IAA8 161 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 MOB3CQ70IA8 216 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 FAM214BQ7L5A3 538 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 GCNT2Q8N0V5 402 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 MRGPRFQ96AM1 343 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 PRRT1Q99946 306 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 PECRQ9BY49 303 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF436Q9C0F3 470 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-201ENST00000269318 DLL4Q9NR61 685 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 NGFP01138 241 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 PLCXD3Q63HM9 321 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms