RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ARHGAP5-AS1Q96IT6 56 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 DLL4Q9NR61 685 aa12.47□□□□□ -0.41
CDH3-201ENST00000264012 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 EPOPA6NHQ4 379 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 IGHA1P01876 353 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 FLI1Q01543 452 aaPredicted RBP12.46□□□□□ -0.41
CDH3-201ENST00000264012 ZBTB37Q5TC79 503 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 PLSCR3Q9NRY6 295 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 CENPVL1A0A0U1RR11 272 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 E5RGE8 158 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 LGALS8O00214 317 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 SSSCA1O60232 199 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 CTAG2O75638 210 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 NDUFB6O95139 128 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 IL5P05113 134 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 ZFP36L2P47974 494 aaKnown RBP12.46□□□□□ -0.41
CDH3-201ENST00000264012 RAB5CP51148 216 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 CLPPQ16740 277 aaPredicted RBP12.46□□□□□ -0.41
CDH3-201ENST00000264012 SLC25A30Q5SVS4 291 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 OR2T2Q6IF00 324 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.41
CDH3-201ENST00000264012 GPA33Q99795 319 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 PLEKHA2Q9HB19 425 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 NSG2Q9Y328 171 aa12.46□□□□□ -0.41
CDH3-201ENST00000264012 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 PATE4P0C8F1 98 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 HIST1H1DP16402 221 aaKnown RBP12.46□□□□□ -0.42
CDH3-201ENST00000264012 MVDP53602 400 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 SCAND1P57086 179 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 GLDNQ6ZMI3 551 aaPredicted RBP12.46□□□□□ -0.42
CDH3-201ENST00000264012 C9orf40Q8IXQ3 194 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 LFNGQ8NES3 379 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 S1PR3Q99500 378 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 C19orf12Q9NSK7 152 aa12.46□□□□□ -0.42
CDH3-201ENST00000264012 A0A1W2PR80 420 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 NLRC3Q7RTR2 1065 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 OR52N4Q8NGI2 321 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 ST7LQ8TDW4 575 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 SLC52A3Q9NQ40 469 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 PURGQ9UJV8 347 aaKnown RBP12.45□□□□□ -0.42
CDH3-201ENST00000264012 GVINP1Q7Z2Y8 2422 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 CASP8AP2Q9UKL3 1982 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 S100A7P31151 101 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 THBS3P49746 956 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 PDCD1Q15116 288 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 GAB4Q2WGN9 574 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 GPR87Q9BY21 358 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 RNF150Q9ULK6 438 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 OGG1O15527 345 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 PSMB3P49720 205 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 TM4SF19Q96DZ7 209 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 CHST6Q9GZX3 395 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 MIA3Q5JRA6 1907 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 RGS13O14921 159 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 AQP8O94778 261 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 CNIH1O95406 144 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 ACSM4P0C7M7 580 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 DEFA4P12838 97 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 EXOSC2Q13868 293 aaKnown RBP12.45□□□□□ -0.42
CDH3-201ENST00000264012 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.45□□□□□ -0.42
CDH3-201ENST00000264012 ADAT1Q9BUB4 502 aaKnown RBP12.45□□□□□ -0.42
CDH3-201ENST00000264012 FBXO4Q9UKT5 387 aa12.45□□□□□ -0.42
CDH3-201ENST00000264012 BTBD17A6NE02 478 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 ZNF354AO60765 605 aaPredicted RBP12.44□□□□□ -0.42
CDH3-201ENST00000264012 AVPR2P30518 371 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 ISXQ2M1V0 245 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 TOR2AQ5JU69 321 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CDC20BQ86Y33 519 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 EDARADDQ8WWZ3 215 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
CDH3-201ENST00000264012 ABHD1Q96SE0 405 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 MAGT1Q9H0U3 335 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 PPP1R14DQ9NXH3 145 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 AQP7P3A6NL99 342 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 SARGQ9BW04 601 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 SLC25A32Q9H2D1 315 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 NME2P1O60361 137 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 HEXAP06865 529 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CSRP3P50461 194 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 DHODHQ02127 395 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 ALKBH6Q3KRA9 238 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 C20orf196Q8IYI0 205 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
CDH3-201ENST00000264012 ASB13Q8WXK3 278 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 FBXW5Q969U6 566 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 PILRAQ9UKJ1 303 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 TXNL1O43396 289 aa12.44□□□□□ -0.42
CDH3-201ENST00000264012 CCL3P10147 92 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms