RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 FAM230AA0A1W2PPH8 454 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 MEX3AA1L020 520 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 ANKUB1A6NFN9 424 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF850A8MQ14 1090 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 TXNL1O43396 289 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 SCGNO76038 276 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 S100A9P06702 114 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 NME1P15531 152 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 PTGER4P35408 488 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 CCR5P51681 352 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 OR2B8PP59922 312 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 EIF5AL1Q6IS14 154 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 SEMA6DQ8NFY4 1073 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 MRPL24Q96A35 216 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 SCGB3A2Q96PL1 93 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 RBM24Q9BX46 236 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 RGCCQ9H4X1 137 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 NXT1Q9UKK6 140 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 IGKV1-9A0A0C4DH69 117 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 OR5H15A6NDH6 313 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 DBHP09172 617 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 APOBEC1P41238 236 aaKnown RBP10.91□□□□□ -0.66
CHMP3-201ENST00000263856 CBX5P45973 191 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 CAV2P51636 162 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 TMEM33P57088 247 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 AADACL3Q5VUY0 350 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 IL34Q6ZMJ4 242 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 NOXO1Q8NFA2 376 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ADAMTS17Q8TE56 1095 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 KIRREL1Q96J84 757 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 SLC5A7Q9GZV3 580 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 FREM2Q5SZK8 3169 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 C1orf196B1AJZ1 125 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 SPRY1O43609 319 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-201ENST00000263856 IFNA2P01563 188 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 IFNA21P01568 189 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ARG1P05089 322 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 TBPP20226 339 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 GPR85P60893 370 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 CFHR1Q03591 330 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 TAF9Q16594 264 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 MIDNQ504T8 468 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 GPR173Q9NS66 373 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ALKBH4Q9NXW9 302 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 CARHSP1Q9Y2V2 147 aaKnown RBP10.91□□□□□ -0.66
CHMP3-201ENST00000263856 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 FRYLO94915 3013 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 A6NLC8 198 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 C2CD4DB7Z1M9 353 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ADAM10O14672 748 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 DUX1O43812 170 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 OR2J2O76002 312 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 HKR1P10072 659 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ADAM5Q6NVV9 412 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 OGFOD3Q6PK18 319 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 Q7L0L9 218 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 SGPP2Q8IWX5 399 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 OR2AE1Q8NHA4 323 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ST8SIA1Q92185 356 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 BSCL2Q96G97 398 aaPredicted RBP10.91□□□□□ -0.66
CHMP3-201ENST00000263856 SPACA1Q9HBV2 294 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 SLC2A4RGQ9NR83 387 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF581Q9P0T4 197 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 CA14Q9ULX7 337 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 SRPK3Q9UPE1 567 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 PIGLQ9Y2B2 252 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
CHMP3-201ENST00000263856 FAM186AA6NE01 2351 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 IGHV1OR21-1A0A087WYE8 117 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 hCG_1809904A0A1W2PP81 198 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 A0A1W2PR64 198 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 A0A1W2PRV1 198 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 PRSS44E7EML9 344 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 MFNGO00587 321 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 NXPH3O95157 252 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 OR13C7P0DN81 318 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 CAMLGP49069 296 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 PCK2Q16822 640 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 THEM4Q5T1C6 240 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 OR5L1Q8NGL2 311 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 ERGIC1Q969X5 290 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 IP6K3Q96PC2 410 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 NAA11Q9BSU3 229 aaPredicted RBP10.9□□□□□ -0.66
CHMP3-201ENST00000263856 TMEM100Q9NV29 134 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 C1orf123Q9NWV4 160 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 A0A1W2PPH5 198 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 DHRS7CA6NNS2 312 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 APOC1P02654 83 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 PNLIPP16233 465 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF708P17019 499 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 HNRNPKP61978 463 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHMP3-201ENST00000263856 NAAAQ02083 359 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 SMAD4Q13485 552 aaKnown RBP10.9□□□□□ -0.66
CHMP3-201ENST00000263856 ACTBL2Q562R1 376 aa10.9□□□□□ -0.66
CHMP3-201ENST00000263856 MEX3BQ6ZN04 569 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms