RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RFPL4AA6NLU0 287 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 HSPB2A8KAH6 182 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 RFPL4AL1F8VTS6 287 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 CTSVO60911 334 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 SUMO3P55854 103 aaPredicted RBP10.83□□□□□ -0.67
COL8A1-201ENST00000261037 HSPB2Q16082 182 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 TMEM229BQ8NBD8 167 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 TTC9Q92623 222 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF768Q9H5H4 540 aaKnown RBP10.83□□□□□ -0.67
COL8A1-201ENST00000261037 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 P4HTMQ9NXG6 502 aa10.83□□□□□ -0.67
COL8A1-201ENST00000261037 ZNF320A2RRD8 509 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 WDR38Q5JTN6 314 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 TIGD3Q6B0B8 471 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 TMEM88Q6PEY1 159 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 GALNT16Q8N428 558 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 GSX2Q9BZM3 304 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 COL5A3P25940 1745 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-201ENST00000261037 A0A0B4J2E0 115 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 A0A1B0GX12 115 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 KRASP01116 189 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 CD1EP15812 388 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 BMP5P22003 454 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 PCBP4P57723 403 aaKnown RBP10.83□□□□□ -0.68
COL8A1-201ENST00000261037 NCR3LG1Q68D85 454 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 OR2T6Q8NHC8 308 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 CIB3Q96Q77 187 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-201ENST00000261037 FBXO34Q9NWN3 711 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 COL24A1Q17RW2 1714 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 LYZL6O75951 148 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 SH2D5Q6ZV89 423 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 CTDSP1Q9GZU7 261 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 TREM2Q9NZC2 230 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 MED19A0JLT2 244 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-201ENST00000261037 POU2F2P09086 479 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 PATE4P0C8F1 98 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 OR3A4PP47883 348 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 TMEM215Q68D42 235 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 ZNF485Q8NCK3 441 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 ARHGAP5-AS1Q96IT6 56 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 POM121L2Q96KW2 1035 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 ZNF71Q9NQZ8 489 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-201ENST00000261037 MTCH2Q9Y6C9 303 aa10.83□□□□□ -0.68
COL8A1-201ENST00000261037 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 PPIHO43447 177 aaKnown RBP10.82□□□□□ -0.68
COL8A1-201ENST00000261037 MT-CO3P00414 261 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 CPN1P15169 458 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 NME1P15531 152 aaKnown RBP10.82□□□□□ -0.68
COL8A1-201ENST00000261037 MPLP40238 635 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 TAGLNQ01995 201 aaKnown RBP10.82□□□□□ -0.68
COL8A1-201ENST00000261037 C11orf42Q8N5U0 333 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 OCEL1Q9H607 264 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 C12orf10Q9HB07 376 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 DNAJB12Q9NXW2 375 aaKnown RBP10.82□□□□□ -0.68
COL8A1-201ENST00000261037 GAR1Q9NY12 217 aaKnown RBP10.82□□□□□ -0.68
COL8A1-201ENST00000261037 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-201ENST00000261037 BCL2L11O43521 198 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 MBP02144 154 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 TRAPPC2P0DI81 140 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 TRAPPC2BP0DI82 140 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 CD37P11049 281 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 CTGFP29279 349 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 RAB35Q15286 201 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 LINC01555Q8NAE3 123 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 OR4C3Q8NH37 302 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 MMP25Q9NPA2 562 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 EVPLQ92817 2033 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 TRAV1-2A0A0B4J238 106 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 FCGR3BO75015 233 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 MPZL1O95297 269 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 PEX11BO96011 259 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 HPP00738 406 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 PRICKLE4Q2TBC4 344 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 C12orf73Q69YU5 71 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 RFESDQ8TAC1 157 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 DOK1Q99704 481 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 SRRQ9GZT4 340 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 KCNK15Q9H427 330 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 AKIP1Q9NQ31 210 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 A0A1W2PRD5 423 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 A0A1W2PRF3 423 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 A0A1W2PRM7 423 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 COX7A1P24310 79 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 CCL17Q92583 94 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 MCHR2Q969V1 340 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 FAAP24Q9BTP7 215 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 PSG11Q9UQ72 335 aa10.82□□□□□ -0.68
COL8A1-201ENST00000261037 M0QZ24 198 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 ADAM20O43506 726 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 GOSR1O95249 250 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 OPN1MWP04001 364 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 OPN1MW2P0DN77 364 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 OPN1MW3P0DN78 364 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 C3AR1Q16581 482 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 EDARADDQ8WWZ3 215 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 CABLES2Q9BTV7 478 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 FXYD1O00168 92 aa10.81□□□□□ -0.68
COL8A1-201ENST00000261037 CRYABP02511 175 aaKnown RBP10.81□□□□□ -0.68
COL8A1-201ENST00000261037 SULT1A3P0DMM9 295 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms