RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PIGYQ3MUY2 71 aa10.1□□□□□ -0.79
LIN28A-201ENST00000254231 CA5BP1Q8WTZ4 195 aa10.1□□□□□ -0.79
LIN28A-201ENST00000254231 TMEM246Q9BRR3 403 aa10.1□□□□□ -0.79
LIN28A-201ENST00000254231 SLC7A11Q9UPY5 501 aa10.1□□□□□ -0.79
LIN28A-201ENST00000254231 PRRC2AP48634 2157 aaKnown RBP10.1□□□□□ -0.79
LIN28A-201ENST00000254231 MTRF1O75570 445 aaKnown RBP10.09□□□□□ -0.79
LIN28A-201ENST00000254231 GDNFP39905 211 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 NPBWR2P48146 333 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 CCL8P80075 99 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 RIPPLY1Q0D2K3 151 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 LRRC37A5PQ49AS3 106 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 DOLPP1Q86YN1 238 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 PLEKHJ1Q9NW61 149 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 CCDC59Q9P031 241 aaKnown RBP10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ZNF222Q9UK12 451 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 KMT2EQ8IZD2 1858 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 LOC102725191A0A1B0GVB3 256 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ATP6V1G2-DDX39BF2Z307 99 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 AIPO00170 330 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ZNF254O75437 659 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 MPGP29372 298 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 GABRA2P47869 451 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 MMP16P51512 607 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 CAPZA1P52907 286 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ZNF45Q02386 682 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ECH1Q13011 328 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ZNF684Q5T5D7 378 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ASPHD2Q6ICH7 369 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ZNF782Q6ZMW2 699 aaPredicted RBP10.09□□□□□ -0.79
LIN28A-201ENST00000254231 Q6ZS92 163 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 Q6ZTK2 550 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 OR4D10Q8NGI6 311 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 SLC25A40Q8TBP6 338 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 ZCCHC4Q9H5U6 513 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 IFT46Q9NQC8 304 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 PRR13Q9NZ81 148 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 STEAP1Q9UHE8 339 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 V9GYH0 126 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 TMEM272A0A1B0GTI8 110 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 PROB1E7EW31 1015 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 CDIPTO14735 213 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 MAP2K3P46734 347 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 GSK3AP49840 483 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 MRPL28Q13084 256 aaKnown RBP10.09□□□□□ -0.79
LIN28A-201ENST00000254231 C11orf88Q6PI97 169 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 PDZD9Q8IXQ8 264 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 FBXL14Q8N1E6 418 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 PCNPQ8WW12 178 aaKnown RBP10.09□□□□□ -0.79
LIN28A-201ENST00000254231 NEUROG1Q92886 237 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
LIN28A-201ENST00000254231 SCMH1Q96GD3 660 aa10.09□□□□□ -0.79
LIN28A-201ENST00000254231 PLXNB1O43157 2135 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 SSNA1O43805 119 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 PMP2P02689 132 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 VAMP1P23763 118 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 CASP6P55212 293 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 GNG2P59768 71 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 LRP11Q86VZ4 500 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 ASCC1Q8N9N2 400 aaKnown RBP10.08□□□□□ -0.8
LIN28A-201ENST00000254231 FCAMRQ8WWV6 532 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 TMEM54Q969K7 222 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 GMPPAQ96IJ6 420 aaPredicted RBP10.08□□□□□ -0.8
LIN28A-201ENST00000254231 TMEM59Q9BXS4 323 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 CACNG6Q9BXT2 260 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 BCL2L14Q9BZR8 327 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 ACTR6Q9GZN1 396 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 ISPDA4D126 451 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 H0YL77 283 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 GMDSO60547 372 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 INHBBP09529 407 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 MMP15P51511 669 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 SEC61A1P61619 476 aaKnown RBP10.08□□□□□ -0.8
LIN28A-201ENST00000254231 ROM1Q03395 351 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 RAB35Q15286 201 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 TRAM1Q15629 374 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 PRAMEF6Q5VXH4 476 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 ABLIM2Q6H8Q1 611 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 CCDC190Q86UF4 302 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 OR2Z1Q8NG97 314 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 RNF138Q8WVD3 245 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 OIT3Q8WWZ8 545 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 RNF122Q9H9V4 155 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 RBFOX1Q9NWB1 397 aaKnown RBP10.08□□□□□ -0.8
LIN28A-201ENST00000254231 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
LIN28A-201ENST00000254231 IGKV1-9A0A0C4DH69 117 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 A0A0G2JK05 382 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 A0A1B0GTI1 187 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 METTL21EPA6NDL7 271 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 LYNX1G3V0Z9 82 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 LYRM1O43325 122 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 RBBP9O75884 186 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 LYNX1P0DP58 116 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 ACHEP22303 614 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 GCH1P30793 250 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 TBC1D28Q2M2D7 210 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 CD200R1LQ6Q8B3 271 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 LRRC28Q86X40 367 aaPredicted RBP10.08□□□□□ -0.8
LIN28A-201ENST00000254231 CALHM1Q8IU99 346 aa10.08□□□□□ -0.8
LIN28A-201ENST00000254231 GTF3AQ92664 365 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms