RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 FGF21Q9NSA1 209 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF407Q9C0G0 2248 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 SFT2D2O95562 160 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 CD74P04233 296 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 GUSBP08236 651 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 TMEM50BP56557 158 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 TAS2R31P59538 309 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 MYBPHQ13203 477 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 FAM166AQ6J272 317 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ZDHHC22Q8N966 263 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 TSTD1Q8NFU3 115 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 RPS4Y2Q8TD47 263 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 PHYHIPLQ96FC7 376 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 BSCL2Q96G97 398 aaPredicted RBP10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF285Q96NJ3 590 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 SERINC1Q9NRX5 453 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 PLEK2Q9NYT0 353 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 CLEC1BQ9P126 229 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 HEXBP07686 556 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ACAA1P09110 424 aaPredicted RBP10.58□□□□□ -0.72
USHBP1-201ENST00000252597 EFNA3P52797 238 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ROM1Q03395 351 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF529Q6P280 563 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 EDAQ92838 391 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 TMEM230Q96A57 120 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 FAAP24Q9BTP7 215 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 KCNJ16Q9NPI9 418 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF581Q9P0T4 197 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 GHRLQ9UBU3 117 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 B3GALT5Q9Y2C3 310 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 RIF1Q5UIP0 2472 aaKnown RBP10.57□□□□□ -0.72
USHBP1-201ENST00000252597 OR5H15A6NDH6 313 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 NDUFA2O43678 99 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 F10P00742 488 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 HAGHQ16775 308 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 FNDC7Q5VTL7 733 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 PRSS54Q6PEW0 395 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 UQCC3Q6UW78 93 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 STT3BQ8TCJ2 826 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 ADIPOR1Q96A54 375 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 ZDHHC12Q96GR4 267 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 C2orf50Q96LR7 162 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 LANCL2Q9NS86 450 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 MIOXQ9UGB7 285 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 WIF1Q9Y5W5 379 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 A6NIZ1 184 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 UMAD1C9J7I0 102 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 CLPSP04118 112 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 IGFBP3P17936 291 aaPredicted RBP10.57□□□□□ -0.72
USHBP1-201ENST00000252597 P2RY4P51582 365 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 RAP1BP61224 184 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 RAP1AP62834 184 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 KIAA0895LQ68EN5 471 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 OR9K2Q8NGE7 335 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 ERGIC1Q969X5 290 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 CHST11Q9NPF2 352 aa10.57□□□□□ -0.72
USHBP1-201ENST00000252597 RCC2Q9P258 522 aaKnown RBP10.57□□□□□ -0.72
USHBP1-201ENST00000252597 IGKV1D-8A0A087WSZ0 117 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 C7orf77A4D0Y5 90 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 H7C1Q1 480 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 DXOO77932 396 aaKnown RBP10.56□□□□□ -0.72
USHBP1-201ENST00000252597 IGHV3-9P01782 118 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 PET100P0DJ07 73 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 MTCP1P56278 107 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 SCAND1P57086 179 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 KISS1Q15726 138 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 C9orf135Q5VTT2 229 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 PLXDC2Q6UX71 529 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 C5orf24Q7Z6I8 188 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 HOGA1Q86XE5 327 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 OR56B1Q8NGI3 324 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 ASB10Q8WXI3 467 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 PIGLQ9Y2B2 252 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF727A8MUV8 499 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 MASP2O00187 686 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 BPNT1O95861 308 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 NDUFA6P56556 154 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 PIGPP57054 158 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 SSBP1Q04837 148 aaKnown RBP10.56□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF528Q3MIS6 628 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 ZFP62Q8NB50 900 aaPredicted RBP10.56□□□□□ -0.72
USHBP1-201ENST00000252597 HOXB13Q92826 284 aaPredicted RBP10.56□□□□□ -0.72
USHBP1-201ENST00000252597 DDIT4LQ96D03 193 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 WNT16Q9UBV4 365 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 YIF1AO95070 293 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 ONECUT2O95948 504 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 IFNA2P01563 188 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 PTAFRP25105 342 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 EIF5AP63241 154 aaKnown RBP10.56□□□□□ -0.72
USHBP1-201ENST00000252597 RNF4P78317 190 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 NHLH2Q02577 135 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 PCK2Q16822 640 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 GKN2Q86XP6 184 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms