RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TXNIPQ9H3M7 391 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 MTFP1Q9UDX5 166 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 OR51B4Q9Y5P0 310 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-201ENST00000240185 FIGNL2A6NMB9 653 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 GEMIN2O14893 280 aaKnown RBP12.48□□□□□ -0.41
TARDBP-201ENST00000240185 IRS1P35568 1242 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 CLN3Q13286 438 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 DCAF12Q5T6F0 453 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 RAB24Q969Q5 203 aa12.48□□□□□ -0.41
TARDBP-201ENST00000240185 IGHV3-20A0A0C4DH32 117 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ADAM20O43506 726 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CD22P20273 847 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CYB561P49447 251 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ATP6V1FQ16864 119 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ST6GAL2Q96JF0 529 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 MAP1LC3CQ9BXW4 147 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 C9orf170A2RU37 121 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 KLRC4-KLRK1H3BQV0 150 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 SPRY1O43609 319 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 TMPRSS11DO60235 418 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ALOX12BO75342 701 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 IGHA1P01876 353 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 IGHA2P01877 340 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CD81P60033 236 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 LIPGQ9Y5X9 500 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 COL1A1P02452 1464 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 SRSF9Q13242 221 aaKnown RBP eCLIP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 NUFIP2Q7Z417 695 aaKnown RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 FGF13Q92913 245 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 BADQ92934 168 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 LIMK1P53667 647 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 RPS23P62266 143 aaKnown RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 FAM209BQ5JX69 171 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 TAS1R1Q7RTX1 841 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ZC3HAV1LQ96H79 300 aaKnown RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 TLCD2A6NGC4 264 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 ZNF865P0CJ78 1059 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-201ENST00000240185 FAHP16930 419 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CD40P25942 277 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 GAMTQ14353 236 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 SLC39A5Q6ZMH5 540 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 RABEPKQ7Z6M1 372 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 TMEM178AQ8NBL3 297 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 TTC9Q92623 222 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 OR4C12Q96R67 309 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 FUT9Q9Y231 359 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
TARDBP-201ENST00000240185 CYC1P08574 325 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 HTRA3P83110 453 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-201ENST00000240185 YRDCQ86U90 279 aaKnown RBP12.46□□□□□ -0.41
TARDBP-201ENST00000240185 OR10G4Q8NGN3 311 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 OR10G9Q8NGN4 311 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 OR10G7Q8NGN6 311 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 MS4A7Q9GZW8 240 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-201ENST00000240185 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 ZMIZ1Q9ULJ6 1067 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 PLRG1O43660 514 aaKnown RBP12.46□□□□□ -0.41
TARDBP-201ENST00000240185 LSM11P83369 360 aaKnown RBP eCLIP12.46□□□□□ -0.413e-9■■□□□ 11.9
TARDBP-201ENST00000240185 OR4A47Q6IF82 309 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 NPAS1Q99742 590 aa12.46□□□□□ -0.41
TARDBP-201ENST00000240185 GP1BAP07359 652 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 TMEM33P57088 247 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 NKAIN2Q5VXU1 208 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 SPNS3Q6ZMD2 512 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 CALHM3Q86XJ0 350 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 CPEB3Q8NE35 698 aaKnown RBP12.46□□□□□ -0.42
TARDBP-201ENST00000240185 KLHDC9Q8NEP7 349 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 PRSS50Q9UI38 385 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 A0A096LPE4 126 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 A0A1W2PPZ6 126 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 MBLAC1A4D2B0 266 aaPredicted RBP12.46□□□□□ -0.42
TARDBP-201ENST00000240185 TMEM202A6NGA9 273 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 OR2T8A6NH00 312 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 FGF17O60258 216 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 RHBDL1O75783 438 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 INHBBP09529 407 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 FUT3P21217 361 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 ARR3P36575 388 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 TCL1AP56279 114 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 AGERQ15109 404 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 OR10G8Q8NGN5 311 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 RNF2Q99496 336 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 AKIRIN1Q9H9L7 192 aaPredicted RBP12.46□□□□□ -0.42
TARDBP-201ENST00000240185 PITPNC1Q9UKF7 332 aa12.46□□□□□ -0.42
TARDBP-201ENST00000240185 MED1Q15648 1581 aaPredicted RBP12.45□□□□□ -0.42
TARDBP-201ENST00000240185 DSCR3O14972 297 aa12.45□□□□□ -0.42
TARDBP-201ENST00000240185 GABRA1P14867 456 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms