RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 OR2F1Q13607 317 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 TMEM128Q5BJH2 165 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 PLA2G2CQ5R387 149 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 CDCP2Q5VXM1 449 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 TMEM42Q69YG0 159 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF660Q6AZW8 331 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-201ENST00000237186 RGS7BPQ6MZT1 257 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF774Q6NX45 483 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 GALNTL5Q7Z4T8 443 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 KCNRGQ8N5I3 272 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 OR5D18Q8NGL1 313 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 MARCH1Q8TCQ1 289 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 S100A13Q99584 98 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 FOXB1Q99853 325 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 BOKQ9UMX3 212 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-201ENST00000237186 TNFSF18Q9UNG2 199 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 GPR179Q6PRD1 2367 aa14.12□□□□□ -0.15
UBE3D-201ENST00000237186 TTC28Q96AY4 2481 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 A0A0B4J2A0 478 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 C21orf140B9A014 251 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 TERTO14746 1132 aaKnown RBP14.11□□□□□ -0.15
UBE3D-201ENST00000237186 ACKR3P25106 362 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 GDF1P27539 372 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 BLVRBP30043 206 aaPredicted RBP14.11□□□□□ -0.15
UBE3D-201ENST00000237186 ARFRP1Q13795 201 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 PDSS1Q5T2R2 415 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 C1QTNF12Q5T7M4 302 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 OR5H2Q8NGV7 314 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 NPRL2Q8WTW4 380 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 PCNPQ8WW12 178 aaKnown RBP14.11□□□□□ -0.15
UBE3D-201ENST00000237186 CPNE2Q96FN4 548 aaPredicted RBP14.11□□□□□ -0.15
UBE3D-201ENST00000237186 REEP6Q96HR9 211 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 RGCCQ9H4X1 137 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 C5orf66Q9H5L9 145 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 COMMD9Q9P000 198 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 LRFN1Q9P244 771 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 SHPKQ9UHJ6 478 aa14.11□□□□□ -0.15
UBE3D-201ENST00000237186 IGKV3D-15A0A087WSY6 115 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 NEURL1O76050 574 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 AKR1C4P17516 323 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 AMY2BP19961 511 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 PRKACBP22694 351 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 FPR2P25090 351 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 TAS2R46P59540 309 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 PSG4Q00888 419 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 ASCL4Q6XD76 172 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 TMEM17Q86X19 198 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 ZNF100Q8IYN0 542 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 PPP1R1CQ8WVI7 109 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 THOC3Q96J01 351 aaKnown RBP14.1□□□□□ -0.15
UBE3D-201ENST00000237186 Q96M66 194 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 FAM173AQ9BQD7 235 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 PDCD10Q9BUL8 212 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 OSGIN2Q9Y236 505 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 A0A1W2PNU3 283 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-201ENST00000237186 HPNP05981 417 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 CD59P13987 128 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 SERPINA2P20848 420 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 HGFACQ04756 655 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 CNN3Q15417 329 aaKnown RBP14.1□□□□□ -0.15
UBE3D-201ENST00000237186 CEACAM16Q2WEN9 425 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 DMRTC1Q5HYR2 192 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 SPINK14Q6IE38 97 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 OVCH2Q7RTZ1 564 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 OR5M9Q8NGP3 310 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 TMEM230Q96A57 120 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 ALKBH3Q96Q83 286 aaPredicted RBP14.1□□□□□ -0.15
UBE3D-201ENST00000237186 OR2H1Q9GZK4 316 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 WNT5BQ9H1J7 359 aa14.1□□□□□ -0.15
UBE3D-201ENST00000237186 hCG_1807616A0A1W2PRN6 198 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 I3L521 148 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 CCSO14618 274 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 LCATP04180 440 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 B4GALT1P15291 398 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 VAMP1P23763 118 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 MTCP1P56278 107 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 SURF2Q15527 256 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-201ENST00000237186 STK11Q15831 433 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 AADACL3Q5VUY0 350 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 ALKAL2Q6UX46 152 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 OR2M7Q8NG81 312 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 OR5AP2Q8NGF4 316 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 OR10K1Q8NGX5 313 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 PIGTQ969N2 578 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 REG4Q9BYZ8 158 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 GPR173Q9NS66 373 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 RDH8Q9NYR8 311 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 FOXJ2Q9P0K8 574 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 PCSK5Q92824 1860 aa14.09□□□□□ -0.15
UBE3D-201ENST00000237186 MMP7P09237 267 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 OR3A2P47893 321 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 SNU13P55769 128 aaKnown RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 UBA52P62987 128 aaKnown RBP14.08□□□□□ -0.16
UBE3D-201ENST00000237186 TMEM164Q5U3C3 297 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 ACOT7LQ6ZUV0 252 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 OR13G1Q8NGZ3 307 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 OR2AE1Q8NHA4 323 aa14.08□□□□□ -0.16
UBE3D-201ENST00000237186 RBPMSQ93062 196 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms